Profile of regulator TPP in Pseudomonadaceae
Properties
| Regulator family: |
RF00059 |
| Regulation mode: |
|
| Biological process: |
Thiamine biosynthesis |
| Effector: |
Thiamine pyrophosphate |
| Regulog: |
TPP - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA4973 |
thiC |
-227 |
62.5 |
GGGGTTCTTGTCGGGGTGCCCTATACGAGGGGCTGAGATCGGATAGTTCCGGATCCCGTTGAACCTGATCGGGCTAGCGTCCGGTTCCGCCTCGCGCGGACCGCAGCAACCCGCGTAGGGAACAAGATGTCCGCGCCA |
|
Pseudomonas entomophila L48
|
|
PSEEN4977 |
thiC |
-266 |
83.3 |
CATGTTCTTGTCGGGGTGCCTTGAAGCAAAGGCTGAGATCGCAAAGTTGCGGATCCCGTTGAACCTGATCAGGTTAGCGCCTGCGTAGGGAACAAGATTGCTCTCATT |
|
Pseudomonas putida KT2440
|
|
PP3185 |
tenA |
-192 |
69.1 |
GCGCCACCAAGGGGAGCCCGGCAATGGGCTGAGAAACCGCTGAACGCTACAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCT |
|
PP4922 |
thiC |
-262 |
79.8 |
CATGTTCTTGTCGGGGTGCCTTGAAGCAAAGGCTGAGATCGCAGAGGTGCGGATCCCGTTGAACCTGATCAGGTTAGCGCCTGCGTAGGGAACAAGATTGCTCGCCTT |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO4976 |
thiC |
-262 |
86 |
CGCGTTCTTGTCGGGGTGCCTTGCTATGAGGCTGAGATCGGTTAAACCGGATCCCGTTGAACCTGATCAGGTTAGCGCCTGCGTAGGGAACAAGATTTCTCGTCTC |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_0538 |
thiC |
-267 |
86.4 |
GGTTCTTGTCGGGGTGCCTTGCTATGAGGCTGAGATCGGATAATCCGGATCCCGTTGAACCTGATCAGGTTAGCGCCTGCGTAGGGAACAAGATTTCTCGTCACCC |
|
Pseudomonas mendocina ymp
|
|
Pmen_0609 |
thiC |
-202 |
81.3 |
TAAGTTCTTGTCGGGGTGCCCCATATGCGGGGCTGAGATTGGCAGCTGCCGGATCCCGTTGAACCTGATCAGGTTAAGGCCTGCGTAGGGAACAAGATGTCCTCGCCA |
|
Pseudomonas stutzeri A1501
|
|
PST_3816 |
thiC |
-204 |
82.4 |
GGCGTTCTTGTCGGGGTGCCTTGAAGCGAAGGCTGAGATCGGAAAGTTCCGGATCCCGTTGAACCTGATCAGGTTAAGGCCTGCGTAGGGAACAAGATGTCCTCGTCT |
|
Azotobacter vinelandii AvOP
|
|
Avin_44600 |
thiC |
-196 |
73.1 |
CCGGTACTTGTCGGGGTGCCCCTGTGGGGGCTGAGATCGGCCGAGGCCGGGTCCCGTTGAACCTGATCAGGGTGACGCCTGCGTAGGGAACAAGACGTCCTCGCTG |
Export
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Regulatory Sites
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[ FASTA format ]
|
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