Profile of regulator TPP in Pseudomonadaceae

Properties
Regulator family:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Pseudomonadaceae

Member of regulog collections

By taxonomy - Pseudomonadaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Pseudomonas aeruginosa PAO1
	PA4973	thiC	-227	62.5	GGGGTTCTTGTCGGGGTGCCCTATACGAGGGGCTGAGATCGGATAGTTCCGGATCCCGTTGAACCTGATCGGGCTAGCGTCCGGTTCCGCCTCGCGCGGACCGCAGCAACCCGCGTAGGGAACAAGATGTCCGCGCCA
Pseudomonas entomophila L48
	PSEEN4977	thiC	-266	83.3	CATGTTCTTGTCGGGGTGCCTTGAAGCAAAGGCTGAGATCGCAAAGTTGCGGATCCCGTTGAACCTGATCAGGTTAGCGCCTGCGTAGGGAACAAGATTGCTCTCATT
Pseudomonas putida KT2440
	PP3185	tenA	-192	69.1	GCGCCACCAAGGGGAGCCCGGCAATGGGCTGAGAAACCGCTGAACGCTACAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCT
	PP4922	thiC	-262	79.8	CATGTTCTTGTCGGGGTGCCTTGAAGCAAAGGCTGAGATCGCAGAGGTGCGGATCCCGTTGAACCTGATCAGGTTAGCGCCTGCGTAGGGAACAAGATTGCTCGCCTT
Pseudomonas syringae pv. tomato str. DC3000
	PSPTO4976	thiC	-262	86	CGCGTTCTTGTCGGGGTGCCTTGCTATGAGGCTGAGATCGGTTAAACCGGATCCCGTTGAACCTGATCAGGTTAGCGCCTGCGTAGGGAACAAGATTTCTCGTCTC
Pseudomonas fluorescens Pf-5
	PFL_0538	thiC	-267	86.4	GGTTCTTGTCGGGGTGCCTTGCTATGAGGCTGAGATCGGATAATCCGGATCCCGTTGAACCTGATCAGGTTAGCGCCTGCGTAGGGAACAAGATTTCTCGTCACCC
Pseudomonas mendocina ymp
	Pmen_0609	thiC	-202	81.3	TAAGTTCTTGTCGGGGTGCCCCATATGCGGGGCTGAGATTGGCAGCTGCCGGATCCCGTTGAACCTGATCAGGTTAAGGCCTGCGTAGGGAACAAGATGTCCTCGCCA
Pseudomonas stutzeri A1501
	PST_3816	thiC	-204	82.4	GGCGTTCTTGTCGGGGTGCCTTGAAGCGAAGGCTGAGATCGGAAAGTTCCGGATCCCGTTGAACCTGATCAGGTTAAGGCCTGCGTAGGGAACAAGATGTCCTCGTCT
Azotobacter vinelandii AvOP
	Avin_44600	thiC	-196	73.1	CCGGTACTTGTCGGGGTGCCCCTGTGGGGGCTGAGATCGGCCGAGGCCGGGTCCCGTTGAACCTGATCAGGGTGACGCCTGCGTAGGGAACAAGACGTCCTCGCTG

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD