Profile of regulator S15 in Vibrionales

Properties
Regulator family:	RF00114
Regulation mode:
Biological process:	Ribosome biogenesis
Effector:
Regulog:	S15 - Vibrionales

Member of regulog collections

By taxonomy - Vibrionales
By RNA motif - S15
By pathway - Ribosome biogenesis

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Vibrio cholerae O1 biovar eltor str. N16961
	VC0646	rpsO	-63	94.1	GTGTCGGCTGAATCAGAGATTGGCTGACACAAACTTAAACCTCAAACTCTTTAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCTGAATACGCACGTTGCGAAAA
Vibrio vulnificus CMCP6
	VV1_1701	rpsO	-62	96.8	GTGTCGGCTGAATCAGAGATTGGCTGGCACAAATATTAACCTACTCTTATTAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCTGATTACGCACGTGGCGAAGG
Vibrio parahaemolyticus RIMD 2210633
	VP2453	rpsO	-64	91.5	TCGTGTCGGCTGAATCAGAGATTGGCTGGCACAAACATTAACTTACTCTTATTAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCAGAATACGCACAATCTGAA
Vibrio shilonii AK1
	VSAK1_10978	rpsO	-65	91.6	GCGTAGCGGCTGAATCAGAGATTGGCTGCTACAACTTTTAAACTTACTCTTATTAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCGGAATACGCACAAGGCGAA
Vibrio splendidus LGP32
	VS_2479	rpsO	-64	91.4	GCGTAGCGGCTGAATCAGAGATTGGCTGCTACAAATATAAACTTACTCTTATCAGGAGAGATTTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCAGAATACGCACAATCTGAA
Vibrio fischeri ES114
	VF_0489	rpsO	-62	92.9	GTAGTGGCTGAATCAGAGATTGGCTACTACAAATATTAAACTACTCTTATCAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCTGAATACGCACAATCTGAAGG
Vibrio salmonicida LFI1238
	VSAL_I0601	rpsO	-62	92.4	GTAGTGGCTGAATCAGAGATTGGCTGCTGCAAATATTAAACACTCTTACTCAGGAGAGATTTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCAGAATACGCACAATGTGAAAA
Vibrio angustum S14
	VAS14_07319	rpsO	-63	87.1	GGGTGTCGGCTGAATCAGAGATTGGCGGCACAAATTAAAACATCTTTGTATTAGGAATGAGTTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCAGAATACGCACAATGTGAA
Photobacterium profundum SS9
	PBPRA0615	rpsO	-60	81.2	GTGTCGGCTGAATCAGAGATTGGCGACACAAATTAAAAACATCTAGTATTAGGAAGAGTTATGTCTCTGAATGCAGAAACTAAAGCAGCTATCGTTGCTGAATACGCACAATGCGAAAA

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD