Profile of regulator S15 in Vibrionales
Properties
| Regulator family: |
RF00114 |
| Regulation mode: |
|
| Biological process: |
Ribosome biogenesis |
| Effector: |
|
| Regulog: |
S15 - Vibrionales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Vibrio cholerae O1 biovar eltor str. N16961
|
|
VC0646 |
rpsO |
-63 |
94.1 |
GTGTCGGCTGAATCAGAGATTGGCTGACACAAACTTAAACCTCAAACTCTTTAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCTGAATACGCACGTTGCGAAAA |
|
Vibrio vulnificus CMCP6
|
|
VV1_1701 |
rpsO |
-62 |
96.8 |
GTGTCGGCTGAATCAGAGATTGGCTGGCACAAATATTAACCTACTCTTATTAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCTGATTACGCACGTGGCGAAGG |
|
Vibrio parahaemolyticus RIMD 2210633
|
|
VP2453 |
rpsO |
-64 |
91.5 |
TCGTGTCGGCTGAATCAGAGATTGGCTGGCACAAACATTAACTTACTCTTATTAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCAGAATACGCACAATCTGAA |
|
Vibrio shilonii AK1
|
|
VSAK1_10978 |
rpsO |
-65 |
91.6 |
GCGTAGCGGCTGAATCAGAGATTGGCTGCTACAACTTTTAAACTTACTCTTATTAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCGGAATACGCACAAGGCGAA |
|
Vibrio splendidus LGP32
|
|
VS_2479 |
rpsO |
-64 |
91.4 |
GCGTAGCGGCTGAATCAGAGATTGGCTGCTACAAATATAAACTTACTCTTATCAGGAGAGATTTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCAGAATACGCACAATCTGAA |
|
Vibrio fischeri ES114
|
|
VF_0489 |
rpsO |
-62 |
92.9 |
GTAGTGGCTGAATCAGAGATTGGCTACTACAAATATTAAACTACTCTTATCAGGAGAGAATTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCTGAATACGCACAATCTGAAGG |
|
Vibrio salmonicida LFI1238
|
|
VSAL_I0601 |
rpsO |
-62 |
92.4 |
GTAGTGGCTGAATCAGAGATTGGCTGCTGCAAATATTAAACACTCTTACTCAGGAGAGATTTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCAGAATACGCACAATGTGAAAA |
|
Vibrio angustum S14
|
|
VAS14_07319 |
rpsO |
-63 |
87.1 |
GGGTGTCGGCTGAATCAGAGATTGGCGGCACAAATTAAAACATCTTTGTATTAGGAATGAGTTATGTCTCTGAATGCAGAAACTAAAGCAGCAATCGTTGCAGAATACGCACAATGTGAA |
|
Photobacterium profundum SS9
|
|
PBPRA0615 |
rpsO |
-60 |
81.2 |
GTGTCGGCTGAATCAGAGATTGGCGACACAAATTAAAAACATCTAGTATTAGGAAGAGTTATGTCTCTGAATGCAGAAACTAAAGCAGCTATCGTTGCTGAATACGCACAATGCGAAAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
