Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator yybP-ykoY in Vibrionales

Properties
Regulator family: RF00080
Regulation mode:
Biological process:
Effector:
Regulog: yybP-ykoY - Vibrionales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Vibrio cholerae O1 biovar eltor str. N16961
VCA0546 ykoY -209 49.2 GGCGACGTTTTGGGGAGTAGTCGCCTTAGGTTTATTTGTCGTCATCACGTTGAGTTTCACTCAACCGGCAAATATTAAGCTCTGAATCCAAGTTCAACGCTTCGACGAGACCAACGCATTCAATAC
VC0022 COG2119 -153 60.9 GCTCCGTCTTTGGGGAGTAGCTGGTCTCTAAGTTTTCAACTTGGTGATTCACACATCAACATATTTGGTACTCAATTACCATGGTGTGTGAGACCTGAGCCTTCAGGTTTAGCAAGACCTTAGACAAACAACG
Vibrio vulnificus CMCP6
VV20239 ykoY -304 39.3 ATCGAACGTTTGGGGAGTAGTTAGCGTAAGTTTATTTGTCGTCATCTCGTTAGGCCAAAGCCTTTCCGGCAAATAAAGGTGAGTTATCCTCTCTTTGTTTCTTTGTCATCAACAGAAACAGAGAAAGCATTCCAGTTCACTTCAACGAGACCAACGCATTCATAC
VV20505 COG0530 -323 52.5 ATAGCGCCGCTTAAGGGAGTAGCCTTCCTCATGGTTTGAGGAGTGAATATCAACAGTCTCCGAGCTTAATGCTTGTGGTATTCACGTTCATCTGTTCTGGCAAGACTTAAGCAAAGTTT
VV1_0988 COG2119 -206 54.3 TGCGCCTGTCTTTGGGGAGTAGCTTACTGGATGAAAAGCCATTTTCATCGAGTTCGTCCGTCAACATAATTGGTGCCAAATCACCATGGCGTTCGAGACTTGAAGCCTTTCAAGTTTAGCAAGACCTTAGACAAACAA
Vibrio harveyi ATCC BAA-1116
VIBHAR_05912 ykoY -209 43.3 TGATGGCGGCGTTTGGGGAGTAGTTAGCGCAAGTTTATTTATCGTCATCTCGTTAAGCATCAGCTTATCCGGTAAATAAAGGTGTCACCTGATTCATCAAGTGATCACTTCAACGAGACCAACGCATTCATT
VIBHAR_00451 COG2119 -207 55.5 CGCTTGTCTTTGGGGAGTAGCTTACTCGATGAAATGTCTTTTTCATCCAGTTCGTTCGTCAACATAATTGGTGCAAAATCACCATGGCGTTCGAGACTCATCAACCCGATGAGTTTAGCAAGACCTTAGACAAATCATC
Vibrio parahaemolyticus RIMD 2210633
VPA0856 ykoY -285 47 ATGGCGGCGTTTGGGGAGTAGTTAGCGCAAGTTTACTTATCGTCATCTCGTTAAGCGATAGCTTATCCGGTAAGTAAAGGTGTCTGATTGAACATTCAATCTTGGCACTTCAACGAGACCAACGCATTCATTGA
VP0023 COG2119 -205 56 CGCCTGTCTTTGGGGAGTAGCTTACCTGATGAAGTCTCTGTTTCATCCGGTTCGTTCGTCAACATAATTGGTGCAAAATCACCATGGCGTTCGAGACTTGAAGCCTTTCAAGTTTAGCAAGACCTTAGACAAATCATC
Vibrio shilonii AK1
VSAK1_14500 ykoY -196 56.2 CCGCTCGTTTTGGGGAGTAGTCACCCGTTTATTTGTCGTCATCTCGTTAAGTCTAGAGCTTATCCGGCAAATAAGAGCGCAGACAGCGCTTTGACGAGACCAACGCAATCAAATG
VSAK1_12657 COG2119 -203 62.4 CCGCCATCTTTGGGGAGTAGCTTATTCGGACTCTAGCAAGAGTCAGAATTCGTTCGTCAACATAATTGGTGCAAAATCACCATGGCGTTCGAGACTTGTGCCAACAAGTTTAGCAAGACCTTAGATAAACATCG
Vibrio splendidus LGP32
VS_II0779 ykoY -155 49.6 TTATCCACGCGTTTGGGGAGTAGTTAGCGCAAGTTTACATGTCGTCATCTCGTTAGGCTAAGAGCCTATCCGGTATGTAAAGGTGAAATCCCATATTTCACTTCAACGAGACCAACGCAATCACA
VS_0035 COG2119 -209 47.1 TCGCGGTCTTTGGGGAGTAGCTTACTTATTCATATCCTATTGAATGAGTTCGTTCGTCAACATAATTGATGCAAAATCATCATGGCGTTCGAGGCAACCACCACCTTGGTGGCGCTTAGCAAGACCTTAGACAAGCATCG
Vibrio fischeri ES114
VF_A0964 COG2119 -208 60.3 CCTTACTCTTTGGGGAGTAGCCTGCTTTCTCGTTTTCATAAAAATACATAAAACAGAAAGCTCATATATCAACATAATTGATGCAAAATCATCATGGTATATGAGACAAGCCTGAGCAGCTTGTTTGGCAAGACCTTAGATTAACATCA
VF_A0278 ykoY -216 49.6 TATCCAGATCATTGGGGAGTAGTCACAAGATTTAATACTTAATCTTGTTCAGATATCGTCATCCCGAAGCTTTGGCTTCCGGTATCTGTAAGTGGGCAAAGGTTGCCAATCGCTTTGACAAGACCAAAACCATAACA
Vibrio salmonicida LFI1238
VSAL_II1080 COG2119 -212 55 GCCCTTACTCTTTGGGGAGTAGCCCGCTTTCTTGTTTTAATCGCTTAGGCAAAATAAGCAGAAAGTTCGTATATCAACATAATTGATGCAAAATCATCATGGTATACGAGACAAGCATGAGCAACTTGTTCGGCAAGACCTTAGATTAACAT
VSAL_II0027 ykoY -218 55.9 CTATCCGAGTCTTGGGGAGTAGTCACAAGGTTTAATACTTAATCTTGTTCAGATATCGTCATCCCGAAGTTTCGACTTCCGGTATCTGTAAGTGGGCAATGAATGCCAATCACTTTGACAAGACCAATACCATAACG
VSAL_II1094 ykoY -218 55.9 CTATCCGAGTCTTGGGGAGTAGTCACAAGGTTTAATACTTAATCTTGTTCAGATATCGTCATCCCGAAGTTTCGACTTCCGGTATCTGTAAGTGGGCAATGAATGCCAATCACTTTGACAAGACCAATACCATAACG
Vibrio angustum S14
VAS14_22332 COG2119 -148 69.7 TTAGCTTTCCTTTGGGGAGTAGCCTCTCGCACCTTGCGAGATAATTATCAACATAATCGAAGCAAAATCTTCGTGGTAATTATGATTTATCCAGCGCGGTAAATTTGGCAAGACCAACGGCAAACAA
VAS14_02281 ykoY -381 51.6 ATCGCCTTGTTTTGGGGAGTAGTCACAATTGTTCGTCTGTCGTCATCTCGAAGTTTACACTTCCGGCAGCCGTGAATGGATTTGCATTATTATTCATGCACCATTTTGACGAGACCAATGCCATTATC
Photobacterium profundum SS9
PBPRA0058 COG2119 -202 71.8 CCGTTTCCTTTGGGGAGTAGCCTCTCGATCTATCGAGATAATCGTCAACATACTTGAAGCAAAATCTTCATGGCGATTATGACTCACACTAATCCTACTTTAGTGAGTTTGGCGAGACCATTGGTAAACCAGC
PBPRA2002 ykoY -228 54.5 TGCCCCTGTTTGGGGAGTAGTCACCAATTGTTCGTCTGTCGTCATCACGAAGCCCCATGCTTCCGGCAGCCGAGAATGGATTTGTTTCTGTAAAACAGTAAGCACCATTTTGACGAGACCAACGCCATTATTT
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