Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator TPP in Mycobacteriaceae

Properties
Regulator family: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Mycobacteriaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Mycobacterium tuberculosis H37Rv
Rv0423c thiC -102 54.5 GGGGTACCCACGCGGGAGCGCACGCCGAGTGCGCTGAGAGGACGGCTCGGGGCCGTCGACCGTACGAACCTGACCGGGTAATGCCGGCGTAGGGAGTTGCAAATGACCATCA
Rv0415 thiO -100 45.6 CCTGTAGACACGGGAGTCCCGGGAGCGGGGTCTGAGAGTGGGCGCGCCTGCCCTTACCGTCACACCTGATCCGGATCATGCCGGCGAAGGGAGGTCAAGGATGGCGTCCGAC
Mycobacterium leprae TN
ML0294 thiC -101 55.4 AAAAACCACGCGGGAGCACACACCAAGTGCGCTGAGAGGACGGATCGGGGCCGTCGACCGTATGAACCTGACCGGGTAATGCCGGCGTAGGGAGATGAATAATGACTGAAAC
ML0299 thiO -130 41.1 AACTTCAGTACACGGGAGTCCCCAGGCAGTCCGAATCTGCGGGGCTGAGAGTGGGCACAGCCAGAGTGACTGAACCTACCCTTACCCTCCCACACCTGATCCGGGTCATGCCGGCGAAGGGAGGTTCAAGATGCCGTCAG
Mycobacterium marinum M
MMAR_0718 thiO -120 40.9 CTGAAGAACACGGGAGTCCCGGGTAACCAGCGGGGCTGAGAGTGGGCACAGCCGGTGTACAACCGGGCCTGTCCTGACCGTCACACCTGATCCGGGTCATGCCGGCGAAGGGAGCAGTAGATGTCATCCCCA
MMAR_0735 thiC -113 50.1 AATTAACGCACGCGGGAGCGCACACCAACTGCGCTGAGAGGACGGCTGGAGGCCGTCGACCGTAGGAACCTGACCGGATAATGCCGGCGTAGGGAGATGACAGGGAGATGACA
Mycobacterium avium 104
MAV_4731 thiC -102 48.2 TCCATCAGACGCGGGAGCGCACGCCGAGTGTGCTGAGAGGACGGCTCGGGGCCGTCGACCGTACGAACCTGACCGGGTAATGCCGGCGTAGGGAGATGAAAAATGACCGCAAT
MAV_4746 thiO -102 43.3 TCGTTTTAGACACGGGAGTCCCGGGACCGGGGTCTGAGAGTGGGCGCGCCCGCCCTTACCGTCACACCTGATCCGGATCATGCCGGCGAAGGGAGGCCGCGAATGCCCTCG
Mycobacterium sp. JLS
Mjls_0554 thiD -100 54.1 CCACCGACCACGCGGGAGCGCGCACCAGCGCGCTGAGAGGACGACTGGGGTCGTCGACCGTACGAACCTGACCGGGTAATGCCGGCGTAGGGAGTTTTCGATGACCGATA
Mjls_5653 ykoE -102 53.3 CGATAACCCACGCGGGAGTGCACACCGAGTGCGCTGAGAGGACGGCTGGGGCCGTCGACCGTATGAACCTGACCGGGTAATGCCGGCGTAGGGAGTGAACTGATGACCGAC
Mjls_0535 thiO -105 43.7 TGATGGCCGACACGGGAGTCCCGGGACAGCGGGACTGAGAGTGGGCCAGACGATCCGGCCCTTACCGTCGGACCTGATCCGGGTCATGCCGGCGAAGGGAGGGCCATGCCACCGGACAG
Mycobacterium vanbaalenii PYR-1
Mvan_0725 thiC -98 47.4 CACTAACGCGGGAGCGCGTACCGAGCGCGCTGAGAGGACGGGTAGGCCCGTCGACCGTACGAACCTGACCGGGTAATGCCGGCGTAGGGAGAACGCACATGTCTGAC
Mvan_0708 thiO -91 40.4 ACGGGAGTCCCGGGTACGGGGACTGAGAGTGGGCCCGCCGGCTCTTACCGTCACACCTGATCCGGGTCATGCCGGCGAAGGGAGCC
Mycobacterium flavescens PYR-GCK
Mflv_0754 thiC -105 49.5 GTCGACCACTCGCGGGAGTGCTCACCTAGAGCGCTGAGAGGACGGCTATCGGGCCGTCGACCGTCTGAACCTGACCGGGTAATGCCGGCGTAGGGAGCTTCTGAGATGACTGC
Mflv_0970 ykoE -101 47.6 TGGACGCACACGGGAGTGCACACCGAGTGCGCTGAGAGGACGGCTGACCGGCTGTCGACCGTACGAACCTGACCGGGTAATGCCGGCGTAGGGAGATGCACGTGGACCAGCATT
Mflv_0197 thiO -92 41.2 CACACGGGAGTCCCGGGAGCGGGGACTGAGAGTGGGCCCGCCGGCTCTTACCGTCGCACCTGATCCGGATCATGCCGGCGAAGGGAGT
Mflv_0181 thiD -96 41.2 AACACGCGGGAGCGCACACCGAGCGCGCTGAGAGGACGGGTGGTCCCGTCGACCGTACGAACCTGACCGGGTAATGCCGGCGTAGGGAGAACCGAGATGACCCATTCC
Mycobacterium smegmatis str. MC2 155
MSMEG_6726 ykoE -105 58.7 GAACAACCCACGCGGGAGTGCACACCGAGTGCGCTGAGAGGACGGCTGAGGGCCGTCGACCGTATGAACCTGTCCGGGTAATGCCGGCGTAGGGAGTGTGAACTGATGACCG
MSMEG_0791 thiO -102 46.8 ACGGGCAACACGGGAGTCCCGGGAACGGGGACTGAGAGTGGGCATCGCCGGCCCTTACCGTCACACCTGATCCGGGTCATGCCGGCGAAGGGAGCAGGATCTATGACACGTA
MSMEG_0826 thiC -163 51.8 CAGAGAAAACCGCGGGAGTGCGCACCGAGCGCGCTGAGAGGACAGCTGGGGCTGTCGACCGTATGAACCTGACCGGGTAATGCCGGCGTAGGGAGATCGAATGTCCGATAT
Mycobacterium abscessus ATCC 19977
MAB_4218c thiO -113 55.1 GTGTAAGTAACGCGGGAGCCCCGGGATGTCGGGGCTGAGAGTGGGCCAAGGACTCCGGCCCTGACCGTCGTACCTGATCCGGGTCATGCCGGCGAAGGGAGTTGGCTCCGATTGTGA
MAB_4196 thiC -103 55.7 CCCACAAACACGGGAGCACGCACCAGCGTGCTGAGAGGACGGCTAGGGCCGTCGACCGTATGAACCTGACCGGGTAATGCCGGCGTAGGGAGGAGAATTAAGCATGT
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