Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator TPP in Rhizobiales

Properties
Regulator family: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Rhizobiales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Sinorhizobium meliloti 1021
SMb20962 thiD -232 75 AGCGCATTCCGAGGGGAGCACCAGACGGTGCTGAGATGGCGTTGAGCCGGACCCTTGAACCTGATCCGGGTCATGCCGGCGTAGGAACGGAAAGATGGCCGCCA
SMb20615 thiC -209 67.9 CCATTCACCAGGGGGGTCCCGGCAAGGGGCTGAGATACTGCTAGAGCGCGCAGTGACCCGTTGAACCTGATCCAGTTCACACTGGCGTAGGGACGGTGCAGACGTGCGACAGC
SMc03869 thiB -161 65.1 CTGCTCTAACGGGGTGCCCTGGCCGGCTTTGCGACCATGGCTGAGAGGCTTCGAGCCAACCCGCGGAACCTGATCCGGCTCATACCGGCGGAGGGATTAGAAGCGATCGGACCGA
Rhizobium sp. NGR234
NGR_b18410 thiD -162 68.3 CCTCCATTCCGAGGGGAGCGCCGGGCGGCGCTGAGACGGCGGTGAGCCGGACCCTTGAACCTGATCCGGGTCATGCCGGCGTAGGAACGGAACGAGGCTGCCCT
NGR_b02930 thiC -210 73.1 GTCCATTCACCAGGGGGGTCCCGGCAAGGGGCTGAGATACTGCTAGAGCGCGCAGTGACCCGTTGAACCTGATCCAGTTCATACTGGCGTAGGGACGGTGCGGACGTTTGATG
NGR_c32610 thiB -162 61.3 CTGCTCTAACGGGGTGCCTGAGGCCGCTTGCGGTCCCATGGCTGAGAGGCTTCGAGCCAACCCGCGGAACCTGATCCGGCTCGTACCGGCGGAGGGATTAGAAGCGATCGGAACGA
Rhizobium leguminosarum bv. viciae 3841
pRL110443 thiM -148 56.2 CGATGAGAGACAGGGGCGCCCGTCGACAGATGGGCTGAGAAGCACCCTTCGAACCTGAACCGGATAATGCCGGCGGAGGGAGTCGCTCGGGGTCGCGG
pRL100148 thiC -187 63.3 TTGCATTCACCAGGGGGTCCCATCAAGGGGCTGAGGTACTGCTATCGCGCGCAGTGACCCGTTGAACCTGATCCAGTTCATACTGGCGTAGGGACGGTGCAAGCGCTCGAAG
RL4399 ykoF -103 57.8 GCAAATAACAGGGGAGCTCCGTATTGCCGGGGCTGAGATGTGAGGCGCAAGCCTCTGGACCCTTCAAAGCTGATCTGGGTAATGCCAGCGGAGCGAGGTTCAGATGTTCTCAGGC
Rhizobium etli CFN 42
RHE_PB00082 thiC -228 66.5 GACCATTCACCAGGGGTGCCCCGGCAAGGGGCTGAGATTCTGCTGAACAATACGGCTTTGCCTGTTGTGGCGCGGTGACCCGTTGAACCTGATCCAGTTCATACTGGCGTAGGGACGGTGCGGACGCTGCGGC
RHE_CH03864 thiX -273 58.4 CGAAATAACAGGGGAGCTCCGTGTCGCCGGGGCTGAGATGCGAGGCGCAGGCCTCCGAACCCTTCTAAGCTGATCTGGGTAATGCCAGCGGAGCGAGGTCCAAATGTATTTCGGC
RHE_PE00337 thiM -165 54 CGATGAGAGACAGGGGCGTTCGTCGACAGACGGGCTGAGAAGCACCCTTCGAACCTGAACCGGATAATGCCGGCGGAGGGAGTCGCTCGGGGCATCGC
Agrobacterium tumefaciens str. C58 (Cereon)
Atu2714 thiB -149 67.4 TCTTGATCTAACGGGGTGTCTTCTGTGCTTTTGTGCAGAAGGCTGAGAGGCTTGCCAACCCGAAGAACCTGATCCGGTTCATACCGGCGGAGGGATTAGACGGCTTAAAGGC
Atu2569 thiC -208 72.7 GGCCATTCACCAGGGGTGTCCCGTCAAGGGGCTGAGATTCTGCTTTCATGCGCAGTGACCCGTTGAACCTGATCCAGTTCATACTGGCGTAGGGACGGTGCAAAGACCTGATG
Atu3286 thiX1 -227 74.3 GCTCTTCCGAGGGGAGCACCAGACGGTGCTGAGATGGTGGTGAACCGGACCCTTGAACCTGATCCGGGTCATGCCGGCGTAGGAACGGAACTGTCGTGCGCTCG
Mesorhizobium sp. BNC1
Meso_3259 thiB -136 70.4 TCGCTCTAACGGGGTGCCGTCGATTGACGGCTGAGAGGCAAAGGCCAACCCGCGGAACCTGATCCGGCTCATACCGGCGGAGGGATTAGACGCTGAGATAAAGC
Meso_2561 null -222 78.9 ACCATCACCAGGGGGGCCCGGACAACGGGCTGAGATACCGCTGGCTTCAAGCAGCGCGGTGACCCTTTGAACCTGATCCAGTTCATACTGGCGTAGGGATGGTGCGACGGCTTTCCGGG
Mesorhizobium loti MAFF303099
mll3867 thiB -160 70.2 AAACGCTCTAACGGGGTGCCGGACGCGATCTTCGCGGACCGGCTGAGAGGCAGTCTCGCCAACCCGCTGAACCTGATCCGGTTTGTACCGGCGGAGGGATTAGACGTTTCGGACAG
mll5795 thiC -197 70.8 ATGCATTCACCAGGGGAGTCCCGGCAAGGGGCTGAGATACTGCTGGCTTTCGCGGCGCAGTGACCCGTTGAACCTGATCCAGTTCATACTGGCGTAGGGACGGTGCAAGCGCTTTGCG
mll1759 ykoF 165 53.8 CGCCCATCCACAGGGGTGCTCCGTACGGTCGGGGCTGAGACGGGGGCGGCAAGCCCACAGACCCTAGAAGCTGATCTGGGTAATACCAGCGGAGCGAGGCGGGCGATGTTTTCAG
Brucella melitensis 16M
BMEI0285 thiB -210 59.4 AGTCGCTCTAACGGGGTGCCATCTGCTTTTGGGGATGGCTGAGAGGCCAAACAAGGCATTTCCAGCAAAAGCGTGAAACGGTTTTGCATCAGGAAATACTTGAAAACTGCCCGGCCAACCCGCTGAACCTGATCCGGTTTGCACCGGCGGAGGGATTAGACGCTCGATGAAC
BMEI1732 thiD -153 77.7 AAAATTCGTTGGGGTGCCTTGAAAGAGGCTGAGAGACGCATTCTCACGTCAACCCATTGAACCTGATCCGGGTAATACCTGCGTAGGGAACGGAGTTTGGCGCGTCGC
Rhodopseudomonas palustris CGA009
RPA3573 thiO -254 60.2 CCCGTTCCGAGGGGGGCTCCGACGAGGAGCTGAGATACCGCACGCTCGCCGCTTCGCTCCGCGAGGCACAGAGACCGCGGTGACCCTTTGAACCTGATCCGGGTCATGCCGGCGAAGGGACAGGGATGCATCAGACAGT
Bradyrhizobium japonicum USDA 110
blr6655 thiO -115 70 ACCGTTCCGAGGGGTGCTCCGAGGAGGAGCTGAGATACCGCTAAATGGGCAAATCCGCCCAGGACCGCGGTGACCCTTTGAACCTGATCCGGGTCATGCCGGCGAAGGGACAGGGATGTTACAGACGAT
Bradyrhizobium sp. BTAi1
BBta_6222 thiO -97 68.2 CGCGTTCCGAGGGGAGCTCCGAGGGGGAGCTGAGATACCGCACGTGATGCGGTGACCCTTTGAACCTGATCCGGGTCATGCCGGCGAAGGGACAGGGATGCAGCAGACAACC
Nitrobacter winogradskyi Nb-255
Nwi_2464 thiO -122 68.6 GATGTTCCGAGGGGTGCTCCGTCAGGGAGCTGAGATACCGCAAGCGCGCAATCCAAGGCGGATTGCAAGGACCGCGGTGACCCTTTGAACCTGATCCGGGTCATGCCGGCGAAGGGACAGGGATGCTTCATAAGAC
Azorhizobium caulinodans ORS 571
AZC_2607 thiC -245 63.9 CTTATTCCAAGGGGGGCCCCGCGAGGGGGCTGAGATATCGTCTTCCGGTCCGGCCGTAATGGTCCCCGGCGCCACGATGACCCTTCGAACCTGATCCGGGTCATGCCGGCGAAGGGATCGGAATCAGCCTGGCGCCC
AZC_1826 thiD -144 46.8 CCATCTCGTCGGGGTGCCGTCCGTCACGGGCGGCTGAGAGGCCAACGCCAACCCGCGAACCTGATCCGGATCATGCCGGCGGAGGGAACCGAGACTGCGGCGCGCTT
Xanthobacter autotrophicus Py2
Xaut_3515 thiC -213 56.2 AACGTTCCAAGGGGGGTCCCGGAAGGGGCTGAGATTTCGCAAGTCCGTTGGCCTTCAAGGTTTTCGGTGCCGCGTTGACCCTTCGAACCTGATCCGGGTCATACCGGCGAAGGGATCGGAACCCGTGCGCACGGC
Xaut_2223 thiO -85 48.5 AACGGCCTGGGGTGCCACGCATCATGCGCGGCTGAGATCACACCCATCGAACCTGTCTGGGTCATTCCAGCGTAGGGAGACGCCGATGAGCGCCAGC
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