Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator TPP in Chlorobiales

Properties
Regulator family: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Regulog: TPP - Chlorobiales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Chloroherpeton thalassium ATCC 35110
Ctha_2048 thiO -230 51.2 CAAATTCCGTTAGGGGTGTCTGCATAATTTTTTCTACGGTTATGCAGTCTGAGATTATACTCTTAGAACCTGATACAGATAAGCGCACCTGCGCGATGCTGGCGAAGGGAAACGGGAAATGGTTTTG
Ctha_2401 thiC -566 54.6 CAGATTTCATCCGGGGTGCTGCGCCCCTCTGGCGTGGCTGAGATTAGACCCGTTTAACTTGATGCAGGTAATTCTGACGCAAGGATGCGATGAAATGCCGTTTGT
Pelodictyon phaeoclathratiforme BU-1
Ppha_1778 thiC -189 52.2 TCACATCTTGGGGGTGCTGAATTTTTTTCCTGTCCTGCTGGAGGAAAAAAAGAAGGCTGAGATCAAACCCTTATAACTTGATGCAGGTAATGCTGACGCAAGAAAAGATTATGATGGCGTTTT
Chlorobium phaeobacteroides DSM 266
Cpha266_1851 thiC -179 57 TATCATCTTGGGGGTGCTGTCTTTTCCACTGTCTTCAGTGACCACCGGTAAACGATAGCTGAGATTAAACCCTTGTAACTTGATGCAGGTAATGCTGACGCAAGAAAAGATGAAGCTGGCCTTCC
Chlorobium limicola DSM 245
Clim_1669 thiC -190 56.9 AATCATCTTGGGGGTGCCATCTGTTCCGGCCTGCATTGATACAAGCCGGAAGGAGGCTGAGATCAAACCCTTGTAACTTGATGCAGGTAATACTGACGCAAGAAAAGATGGAGCTGCTTTTCT
Prosthecochloris vibrioformis DSM 265
Cvib_1273 thiC -177 62.8 TCACATCTTGGGGGTGCTTTCTTTTGAAGGCTGAGATCACACCCTTGTAACTTGATGCAGGTAATACTGACGCAAGGAAAGATTGAAGCTCTGCTCC
Pelodictyon luteolum DSM 273
Plut_1463 thiC -170 63.7 ACTCATCTTGGGGGTGCTGCTTTAAGGGCAGCTGAGATCAAACCCTTGTAACTTGATGCAGGTAATGCTGACGCAAGGAAAGATGAAGCAGGATTCCA
Chlorobaculum parvum NCIB 8327
Cpar_1540 thiC -178 61.8 AATCATCTTGGGGGTGCCTTGTCGCGGTCGCATAAACGGCAAAGCTGAGATCAAACCCCTACAACTTGATGCAGGTAATGCTGACGCAAGGAAAGATGAAGCAAGACCTCC
Chlorobium phaeobacteroides BS1
Cphamn1_0909 thiC -177 50.5 CAAATCATCTTAGGGGTGCTTGGCGGACAACGTCCGCAGGCTGAGAATAAACTCTTATAACTTGGCGCAGGTAATGCTGACGCAAGAAAAGATGAAGCATGTTGA
Prosthecochloris aestuarii DSM 271
Paes_1007 thi4 -171 60.7 ATGTTTCACCTTGGGGTGCTGCACAATGCGGCTGAGAATAAACCCATACAACTTGATGCAGGTAATACTGACGCAAGGAAAGAAGATGAAACTGCTT
Paes_1561 thiC -172 65.8 AATCATCTTAGGGGTGCTCCGCACAAGGGGCTGAGATTAAACCCTTGACACTTGATGCAGGTAATGCTGACGCAAGGAAAGATGAAGCTTGCTGTTC
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