Profile of regulator TPP in Chlorobiales
Properties
| Regulator family: |
RF00059 |
| Regulation mode: |
|
| Biological process: |
Thiamine biosynthesis |
| Effector: |
Thiamine pyrophosphate |
| Regulog: |
TPP - Chlorobiales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Chloroherpeton thalassium ATCC 35110
|
|
Ctha_2048 |
thiO |
-230 |
51.2 |
CAAATTCCGTTAGGGGTGTCTGCATAATTTTTTCTACGGTTATGCAGTCTGAGATTATACTCTTAGAACCTGATACAGATAAGCGCACCTGCGCGATGCTGGCGAAGGGAAACGGGAAATGGTTTTG |
|
Ctha_2401 |
thiC |
-566 |
54.6 |
CAGATTTCATCCGGGGTGCTGCGCCCCTCTGGCGTGGCTGAGATTAGACCCGTTTAACTTGATGCAGGTAATTCTGACGCAAGGATGCGATGAAATGCCGTTTGT |
|
Pelodictyon phaeoclathratiforme BU-1
|
|
Ppha_1778 |
thiC |
-189 |
52.2 |
TCACATCTTGGGGGTGCTGAATTTTTTTCCTGTCCTGCTGGAGGAAAAAAAGAAGGCTGAGATCAAACCCTTATAACTTGATGCAGGTAATGCTGACGCAAGAAAAGATTATGATGGCGTTTT |
|
Chlorobium phaeobacteroides DSM 266
|
|
Cpha266_1851 |
thiC |
-179 |
57 |
TATCATCTTGGGGGTGCTGTCTTTTCCACTGTCTTCAGTGACCACCGGTAAACGATAGCTGAGATTAAACCCTTGTAACTTGATGCAGGTAATGCTGACGCAAGAAAAGATGAAGCTGGCCTTCC |
|
Chlorobium limicola DSM 245
|
|
Clim_1669 |
thiC |
-190 |
56.9 |
AATCATCTTGGGGGTGCCATCTGTTCCGGCCTGCATTGATACAAGCCGGAAGGAGGCTGAGATCAAACCCTTGTAACTTGATGCAGGTAATACTGACGCAAGAAAAGATGGAGCTGCTTTTCT |
|
Prosthecochloris vibrioformis DSM 265
|
|
Cvib_1273 |
thiC |
-177 |
62.8 |
TCACATCTTGGGGGTGCTTTCTTTTGAAGGCTGAGATCACACCCTTGTAACTTGATGCAGGTAATACTGACGCAAGGAAAGATTGAAGCTCTGCTCC |
|
Pelodictyon luteolum DSM 273
|
|
Plut_1463 |
thiC |
-170 |
63.7 |
ACTCATCTTGGGGGTGCTGCTTTAAGGGCAGCTGAGATCAAACCCTTGTAACTTGATGCAGGTAATGCTGACGCAAGGAAAGATGAAGCAGGATTCCA |
|
Chlorobaculum parvum NCIB 8327
|
|
Cpar_1540 |
thiC |
-178 |
61.8 |
AATCATCTTGGGGGTGCCTTGTCGCGGTCGCATAAACGGCAAAGCTGAGATCAAACCCCTACAACTTGATGCAGGTAATGCTGACGCAAGGAAAGATGAAGCAAGACCTCC |
|
Chlorobium phaeobacteroides BS1
|
|
Cphamn1_0909 |
thiC |
-177 |
50.5 |
CAAATCATCTTAGGGGTGCTTGGCGGACAACGTCCGCAGGCTGAGAATAAACTCTTATAACTTGGCGCAGGTAATGCTGACGCAAGAAAAGATGAAGCATGTTGA |
|
Prosthecochloris aestuarii DSM 271
|
|
Paes_1007 |
thi4 |
-171 |
60.7 |
ATGTTTCACCTTGGGGTGCTGCACAATGCGGCTGAGAATAAACCCATACAACTTGATGCAGGTAATACTGACGCAAGGAAAGAAGATGAAACTGCTT |
|
Paes_1561 |
thiC |
-172 |
65.8 |
AATCATCTTAGGGGTGCTCCGCACAAGGGGCTGAGATTAAACCCTTGACACTTGATGCAGGTAATGCTGACGCAAGGAAAGATGAAGCTTGCTGTTC |
Export
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Regulatory Sites
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[ FASTA format ]
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