Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator ykkC-yxkD in Clostridiaceae

Properties
Regulator family: RF00442
Regulation mode:
Biological process: Multidrug resistance
Effector:
Regulog: ykkC-yxkD - Clostridiaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium kluyveri DSM 555
CKL_2463 ykkD -161 79.4 ATTTAAAGTTTTATAGGGTTCCGCAGTTTGAAATTGATAATTGGTCTGGTCCAAGATAAAACGCACAGTTTGCTGTGTTCACGGAAGGATAAAAGCCTGGGAGAT
Clostridium cellulolyticum H10
Ccel_2446 ykkD -161 81.5 ATATAGTTTTATAGGGTTCCGCAGTTTAATTTAAACAACTGGTCTGGTCCGAGATAAAACGCACAGTTTAATGTGTTCACGGAAGGATAAAAGCCTGGGAGATAT
Clostridium botulinum A str. ATCC 3502
CBO2829 null -185 43.6 GGGACTAGATAGCTAGGGTTCCACCTTAAAATTTTAAGGGTTTGTGACCAAGCGCTATAGCTCTTGTTTTGCAAGAGGCACCTATTGGAATAAAATGCCCGAGGGGG
Clostridium perfringens ATCC 13124
CPF_1040 COG3382 -150 87.5 ATATAAAGTTTTCTAGGGTTCCGTAGCTTTTTAGTTAGTCTGGTCCAAGAGAAAACGCACAGAAAAACTGTGAACACGGAAGGATAAAAGCCTGGGAGAT
Clostridium difficile 630
CD0488 ykkD -175 84.6 ATAGAGTTTTATAGGGTTCCGCAATTATTAATGATTGGTTTGGTCCGAGATAAAACCCACAACATAGTTTTTGTTGTGAACACGGAAGGACAAAAACCTGGGAGATAT
CD2392 COG3382 -159 81.9 TAATTTAGTTTTCTAGGGTTCCGCATTTTATAATGGTCAGGTCCAAGAGAAAACGCACAATTGTTGTGTACACGGAAGGATAAAAGCCTGGGAGAT
Clostridium beijerincki NCIMB 8052
Cbei_3447 COG3382 -155 82 TATTTAAGTTTTCTAGGGTTCCGCAGTTTGTAACTGGCAGGTCCGAGAGAAAACGCATAGTTTATACTATGTTCACGGAAGGATAAAAGCCTGGGAGAT
Clostridium sp. OhILAs
Clos_1298 COG3382 -157 77.3 TTTAAGTTTTCTAGGGTTCCGCAGCTTATAACTGGCAGGTCCGAGAGAAAACACACAGCTAATTGTGTACACGGAAGGATAAAAGCCTGGGAGATAT
Clos_0535 pbuO -188 69.2 GAAAGTGTACCTAGGGTTCCGACGAATGATGGCATTTGTGCTGGTCCAAGTGGTACAGGCATAGGATATATGCTACACCGATAGGATAAAAGCCTGGGCGGGTA
Clostridium butyricum 5521
CBY_1736 COG731 -165 81.1 AAGATAAGTTTTCTAGGGTTCCGCAGTTTATAGCTGGTCAGGTCCAAGAGAAAACGCACAGTAAAATGTGTTCACGGAAGGATAAAAGCCTGGGAGAT
Clostridium bartlettii DSM 16795
CLOBAR_00647 gntR -349 71.3 TTTTATGGTTTTCTAGGGTTCCGTAGTTTGTACTAGCTGGTTCGAGAGAAAACACACAAGTATATTTGTGGACACGGAAAGATAAAAGCCTAGGAGAT
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