Profile of regulator ykkC-yxkD in Clostridiaceae
Properties
| Regulator family: |
RF00442 |
| Regulation mode: |
|
| Biological process: |
Multidrug resistance |
| Effector: |
|
| Regulog: |
ykkC-yxkD - Clostridiaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Clostridium kluyveri DSM 555
|
|
CKL_2463 |
ykkD |
-161 |
79.4 |
ATTTAAAGTTTTATAGGGTTCCGCAGTTTGAAATTGATAATTGGTCTGGTCCAAGATAAAACGCACAGTTTGCTGTGTTCACGGAAGGATAAAAGCCTGGGAGAT |
|
Clostridium cellulolyticum H10
|
|
Ccel_2446 |
ykkD |
-161 |
81.5 |
ATATAGTTTTATAGGGTTCCGCAGTTTAATTTAAACAACTGGTCTGGTCCGAGATAAAACGCACAGTTTAATGTGTTCACGGAAGGATAAAAGCCTGGGAGATAT |
|
Clostridium botulinum A str. ATCC 3502
|
|
CBO2829 |
null |
-185 |
43.6 |
GGGACTAGATAGCTAGGGTTCCACCTTAAAATTTTAAGGGTTTGTGACCAAGCGCTATAGCTCTTGTTTTGCAAGAGGCACCTATTGGAATAAAATGCCCGAGGGGG |
|
Clostridium perfringens ATCC 13124
|
|
CPF_1040 |
COG3382 |
-150 |
87.5 |
ATATAAAGTTTTCTAGGGTTCCGTAGCTTTTTAGTTAGTCTGGTCCAAGAGAAAACGCACAGAAAAACTGTGAACACGGAAGGATAAAAGCCTGGGAGAT |
|
Clostridium difficile 630
|
|
CD0488 |
ykkD |
-175 |
84.6 |
ATAGAGTTTTATAGGGTTCCGCAATTATTAATGATTGGTTTGGTCCGAGATAAAACCCACAACATAGTTTTTGTTGTGAACACGGAAGGACAAAAACCTGGGAGATAT |
|
CD2392 |
COG3382 |
-159 |
81.9 |
TAATTTAGTTTTCTAGGGTTCCGCATTTTATAATGGTCAGGTCCAAGAGAAAACGCACAATTGTTGTGTACACGGAAGGATAAAAGCCTGGGAGAT |
|
Clostridium beijerincki NCIMB 8052
|
|
Cbei_3447 |
COG3382 |
-155 |
82 |
TATTTAAGTTTTCTAGGGTTCCGCAGTTTGTAACTGGCAGGTCCGAGAGAAAACGCATAGTTTATACTATGTTCACGGAAGGATAAAAGCCTGGGAGAT |
|
Clostridium sp. OhILAs
|
|
Clos_1298 |
COG3382 |
-157 |
77.3 |
TTTAAGTTTTCTAGGGTTCCGCAGCTTATAACTGGCAGGTCCGAGAGAAAACACACAGCTAATTGTGTACACGGAAGGATAAAAGCCTGGGAGATAT |
|
Clos_0535 |
pbuO |
-188 |
69.2 |
GAAAGTGTACCTAGGGTTCCGACGAATGATGGCATTTGTGCTGGTCCAAGTGGTACAGGCATAGGATATATGCTACACCGATAGGATAAAAGCCTGGGCGGGTA |
|
Clostridium butyricum 5521
|
|
CBY_1736 |
COG731 |
-165 |
81.1 |
AAGATAAGTTTTCTAGGGTTCCGCAGTTTATAGCTGGTCAGGTCCAAGAGAAAACGCACAGTAAAATGTGTTCACGGAAGGATAAAAGCCTGGGAGAT |
|
Clostridium bartlettii DSM 16795
|
|
CLOBAR_00647 |
gntR |
-349 |
71.3 |
TTTTATGGTTTTCTAGGGTTCCGTAGTTTGTACTAGCTGGTTCGAGAGAAAACACACAAGTATATTTGTGGACACGGAAAGATAAAAGCCTAGGAGAT |
Export
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Regulatory Sites
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[ FASTA format ]
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