Profile of regulator TPP in Chloroflexia

Properties
Regulator family:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Chloroflexia

Member of regulog collections

By taxonomy - Chloroflexi
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Chloroflexus aggregans DSM 9485
	Cagg_3115	COG0011	-184	70.2	TATGTAGCGAGGGGTGCCGGGAGAGCCTGGCTGAGAGTGCGGCCCAACTGATGCCGCTAACCCTTTGAACCTGATCTGGGTTATGCCAGCGGAGGGATTGCTAAGTGATGTGACGTA
	Cagg_3165	thiM	-227	64.8	ATAGATGCCAGGGGAGCCTGGGGGAGCCGGGCTGAGAGGGTACCTTATGGCTATTGCCACCGGTACCGACCCTCTGAACCTGATCTGGGTTATGCCAGCGGAGGGAGGAGCAGTTCGCAGACTCG
Chloroflexus sp. Y-400-fl
	Chy400_0862	tenA	-193	56.2	GTGTTCCGTAGGGGCGCTTTGCGACAAACGCGAGGCTGAGAGGAACCCTTGAACCTGATCCGGGTAATACCGGCGTAGGAAATCGGAACCGGGCACGATGT
	Chy400_0456	COG0011	-197	67.7	TACGCGCTGCCAGGGGAGCCGGGTAAGCCCGGCTGAGAGTGCGGCCCGATTGATGCCGCTGACCCTTTGAACCTGATCTGGGTTATGCCAGCGGAGGGAAGGCGTATTGATGATACC
	Chy400_0401	thiM	-228	61.8	ACTAATAAGCCAGGGGAGCCTGGGAGAACCGGGCTGAGAGGGTGTCTAGGCGTATCGCCACCGACACCGACCCTTTGAACCTGATCTGGGTTATGCCAGCGGAGGGAGGAGCAGGGTGCAGGTG
	Chy400_0859	cytX	-202	59.2	ACAGCGTGTATGAGGGAGATCGGGGAGCCGGGCTGAGAGGATGGTCGCTATCCACCATCGACCTCGTGAACCTGCTCTGGGTAATGCCAGCGAAGGGAATACACGGTGGTTTATG
Roseiflexus castenholzii DSM 13941
	Rcas_0665	COG0011	-157	58.1	AGGGGAGCCAGGTGAGCCTGGCTGAGAGTGCGGCCCGACGATGCCGCTGACCCTTTGAACCTGACCTGGGTTATGCCAGCGTAGGGAATG
	Rcas_1431	tenA	-241	55.8	CAGTGTTCCGTAGGGGCGCTTCGCTGACGCGGCGAGGCTGAGAGGGCACCCTTTGCACCTGATCCGGGTAATGCCGGCGTAGGAAATCGGAACGGTCGCTGA
	Rcas_4121	thiE	-180	71.7	GGCGCCACTGGGGGAGCCGGATGAGTCCGGCTGAGAGTGCGACCCTACCGATGTCGCAGACCCTTTGAACCTGACCTGGGTCATACCAGCGTAGGGAAGTGTCCAGACAATGTCTG
Roseiflexus sp. RS-1
	RoseRS_1028	tenA	-221	60.4	TACCGTTCCGTAGGGGCGCTTCGCTGACAGAGCGAGGCTGAGAAGTTACCCTTCGCACCTGATCCGGGTAATGCCGGCGTAGGAAATCGGAACCGGTCATCGG
	RoseRS_0668	COG0011	-218	59.6	AGGGGAGCCAGGAGAGCCTGGCTGAGAGTGCGGCCCCCACAATGCCGCTGACCCTTTGAACCTGACCTGGGTCATACCAGCGTAGGGAATG
	RoseRS_2771	cytX	-175	73.8	TAAGCGTGTATGAGGGAGCTCGGAGGACCGGGCTGAGAGGATGGTCAAATCCACCATCGACCTCATGAACCTGATCTGGGTAATACCAGCGAAGGGAATACACGGTAGTAAAGC
	RoseRS_1927	thiE	-183	68.2	ACGGCGCCACTGGGGGAGCCAGGCGAGCCTGGCTGAGAGTGCGGCCCCATCGATGCCGCAGACCCTTTGAACCTGACCTGGGTCATACCAGCGTAGGGAAGTGTCCAGACCAGAGT
Herpetosiphon aurantiacus ATCC 23779
	Haur_0261	thiB	-160	78.2	ACAACCGCTAGGGGAGCCATGTGGCTGAGATTTCGCAACGGCGAAAGACCCTCTGAACCTGATCTCGTTAGCACGAGCGAAGGAAAGCGGCGTGGTTTGATCCC

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD