Profile of regulator TPP in Chloroflexia
Properties
| Regulator family: |
RF00059 |
| Regulation mode: |
|
| Biological process: |
Thiamine biosynthesis |
| Effector: |
Thiamine pyrophosphate |
| Regulog: |
TPP - Chloroflexia |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Chloroflexus aggregans DSM 9485
|
|
Cagg_3115 |
COG0011 |
-184 |
70.2 |
TATGTAGCGAGGGGTGCCGGGAGAGCCTGGCTGAGAGTGCGGCCCAACTGATGCCGCTAACCCTTTGAACCTGATCTGGGTTATGCCAGCGGAGGGATTGCTAAGTGATGTGACGTA |
|
Cagg_3165 |
thiM |
-227 |
64.8 |
ATAGATGCCAGGGGAGCCTGGGGGAGCCGGGCTGAGAGGGTACCTTATGGCTATTGCCACCGGTACCGACCCTCTGAACCTGATCTGGGTTATGCCAGCGGAGGGAGGAGCAGTTCGCAGACTCG |
|
Chloroflexus sp. Y-400-fl
|
|
Chy400_0862 |
tenA |
-193 |
56.2 |
GTGTTCCGTAGGGGCGCTTTGCGACAAACGCGAGGCTGAGAGGAACCCTTGAACCTGATCCGGGTAATACCGGCGTAGGAAATCGGAACCGGGCACGATGT |
|
Chy400_0456 |
COG0011 |
-197 |
67.7 |
TACGCGCTGCCAGGGGAGCCGGGTAAGCCCGGCTGAGAGTGCGGCCCGATTGATGCCGCTGACCCTTTGAACCTGATCTGGGTTATGCCAGCGGAGGGAAGGCGTATTGATGATACC |
|
Chy400_0401 |
thiM |
-228 |
61.8 |
ACTAATAAGCCAGGGGAGCCTGGGAGAACCGGGCTGAGAGGGTGTCTAGGCGTATCGCCACCGACACCGACCCTTTGAACCTGATCTGGGTTATGCCAGCGGAGGGAGGAGCAGGGTGCAGGTG |
|
Chy400_0859 |
cytX |
-202 |
59.2 |
ACAGCGTGTATGAGGGAGATCGGGGAGCCGGGCTGAGAGGATGGTCGCTATCCACCATCGACCTCGTGAACCTGCTCTGGGTAATGCCAGCGAAGGGAATACACGGTGGTTTATG |
|
Roseiflexus castenholzii DSM 13941
|
|
Rcas_0665 |
COG0011 |
-157 |
58.1 |
AGGGGAGCCAGGTGAGCCTGGCTGAGAGTGCGGCCCGACGATGCCGCTGACCCTTTGAACCTGACCTGGGTTATGCCAGCGTAGGGAATG |
|
Rcas_1431 |
tenA |
-241 |
55.8 |
CAGTGTTCCGTAGGGGCGCTTCGCTGACGCGGCGAGGCTGAGAGGGCACCCTTTGCACCTGATCCGGGTAATGCCGGCGTAGGAAATCGGAACGGTCGCTGA |
|
Rcas_4121 |
thiE |
-180 |
71.7 |
GGCGCCACTGGGGGAGCCGGATGAGTCCGGCTGAGAGTGCGACCCTACCGATGTCGCAGACCCTTTGAACCTGACCTGGGTCATACCAGCGTAGGGAAGTGTCCAGACAATGTCTG |
|
Roseiflexus sp. RS-1
|
|
RoseRS_1028 |
tenA |
-221 |
60.4 |
TACCGTTCCGTAGGGGCGCTTCGCTGACAGAGCGAGGCTGAGAAGTTACCCTTCGCACCTGATCCGGGTAATGCCGGCGTAGGAAATCGGAACCGGTCATCGG |
|
RoseRS_0668 |
COG0011 |
-218 |
59.6 |
AGGGGAGCCAGGAGAGCCTGGCTGAGAGTGCGGCCCCCACAATGCCGCTGACCCTTTGAACCTGACCTGGGTCATACCAGCGTAGGGAATG |
|
RoseRS_2771 |
cytX |
-175 |
73.8 |
TAAGCGTGTATGAGGGAGCTCGGAGGACCGGGCTGAGAGGATGGTCAAATCCACCATCGACCTCATGAACCTGATCTGGGTAATACCAGCGAAGGGAATACACGGTAGTAAAGC |
|
RoseRS_1927 |
thiE |
-183 |
68.2 |
ACGGCGCCACTGGGGGAGCCAGGCGAGCCTGGCTGAGAGTGCGGCCCCATCGATGCCGCAGACCCTTTGAACCTGACCTGGGTCATACCAGCGTAGGGAAGTGTCCAGACCAGAGT |
|
Herpetosiphon aurantiacus ATCC 23779
|
|
Haur_0261 |
thiB |
-160 |
78.2 |
ACAACCGCTAGGGGAGCCATGTGGCTGAGATTTCGCAACGGCGAAAGACCCTCTGAACCTGATCTCGTTAGCACGAGCGAAGGAAAGCGGCGTGGTTTGATCCC |
Export
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Regulatory Sites
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[ FASTA format ]
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