Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator PreQ1 in Clostridiaceae

Properties
Regulator family: RF00522
Regulation mode:
Biological process: Queuosine biosynthesis
Effector: Pre-queuosine1
Regulog: PreQ1 - Clostridiaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium kluyveri DSM 555
CKL_0422 COG1924 -138 25.9 CAAGACAGTTCGTGACCATCCTGTCTATAAACAAAACTAGGGGAATCT
Clostridium cellulolyticum H10
Ccel_1404 queT -124 20.8 AAAAGACAGTTCGTGACCATCCTGTCTAAAAACAAAACTATGGCGACGC
Clostridium phytofermentans ISDg
null queT -55 19.3 TTAAACCGTGTGTTCGGGACCTTCCACACGTAAAACAAAACTAAAGGAGA
Clostridium tetani E88
CTC02339 queT -52 26.1 TATGGACAGTTCGTAACCATCCTGTCCCTAAATAAAACTATGGAGGTAT
Clostridium acetobutylicum ATCC 824
CAC2413 queT -57 24.5 ATTTAAGACAGTTCGAAACCATCCTGTCTATAAATAAAACTATGGAGGT
CAC3622 COG1924 -124 18.4 TAAGACAGTTCGCAATCCATCCTGTCTATAAACAAAACCAGGGCAATAT
Clostridium botulinum A str. ATCC 3502
CBO3177 queT -54 24 TAATAGACAGTTCGTAACCATCCTGTCTTTAATAAAAACTATGGAGGTAT
CBO1552 COG1924 -417 23.7 TAAAGACAGTTCGTAACCATCCTGTCTATAAATAAAACTAGGACGTAGC
Clostridium novyi NT
NT01CX_0338 queT -278 24.4 AAAGTAGACAGTTCGTAAGCCTCCTGTCTATAAACAAAACTAAGGTAAA
NT01CX_2382 COG1924 -155 23.3 TAAGACAGTTCGTAACCATCCTGTCTATAAACAAAACTAGGACTTTAT
Clostridium perfringens ATCC 13124
CPF_1749 queT -254 17.8 TATATAGACAGTTCGAAAGCCTCCTGTCTTTAAATAAAACTACGGTGTT
CPF_2260 iunH -375 54.8 TTTGGTAGAGGTTCGTAACCATCCCTCTATAAAAAACTAAGGGCTG
Clostridium difficile 630
CD1682 iunH -143 44.3 CTGTACTTGTTCGAGAACTCCAAGTATAAAAAACTAAGGAATTAT
Clostridium beijerincki NCIMB 8052
Cbei_2538 queD -207 19 TACGGACAGTTCATTAAGACCATCCTGTCATTAAAAAAAACTAGGCATTTTA
Cbei_0741 queT -272 17.6 TATAGTCAGTTCGAAAGCCTCCTGACTTAAAATAAAACTACGGTTAAAT
Clostridium sp. OhILAs
Clos_0047 queT -52 24.5 TTATGTCAGTTCGCAACCATCCTGACAATAAACAAAACTAGGAGGAAGA
Clostridium sp. L2-50
CLOL250_00654 queD -336 15.9 TGACAGTTCATTAATACCATCCTGTCACTAAACAAAACTAGGAAAACAC
Clostridium scindens ATCC 35704
CLOSCI_01962 queT -57 22.5 ATGAATCGTGTGTTCGAGACCTTCCACACGTAAAACAAAACTAAAGGAGA
Clostridium nexile DSM 1787
CLONEX_03575 queT -55 20.9 AAAGAGTGTTCGCGACCTTCCACTCGTAAAACAAAACTAAAGGAGAAA
CLONEX_00551 iunH -87 49.7 CTGGACTGGTTCGAAAACTTCCCAGAATAAAAAACTAAGGATTGAA
Clostridium hiranonis DSM 13275
CLOHIR_00398 iunH -145 39.3 TGGGGCTTGTTCGAGAACTCCAAGCATAAAAAACTAAGGATCTTA
Clostridium butyricum 5521
CBY_1903 queT -395 17.2 ATTATAGTCAGTTCGAAAGCCTCCTGACTTAAAATAAAACTACGGTTAA
Clostridium bolteae ATCC BAA-613
CLOBOL_02330 queT -57 19.8 GACCGGTGTGTTCGAGACCTTCCACACCTAAAACAAAACTAAAGGAGA
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