Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator Lysine in Clostridiaceae

Properties
Regulator family: RF00168
Regulation mode:
Biological process: Lysine biosynthesis
Effector: Lysine
Regulog: Lysine - Clostridiaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Clostridium kluyveri DSM 555
CKL_1545 lysP -295 105.9 TTTAAGATAGAGGTGCAAAATTTATAAGTAAAGTTTTGGAGGCAAGCACAATGAAGGGACTTAAAAGGAAATTTTGCCGAAGTGTTCAACAGATGCTTTGATGTTGAATTAACTGGTTTTGTATAAAATATATACAAGACTGTCACAAATATAATTTGTGAAGAGCTATCATTCATTG
CKL_0607 lysC -401 97.2 CCTAGGGTAGAGGTGCTGTAATTAATAGTATTTATTTTTAATCGGCAGATGTTTGAGGAATAAAGAAAGGAATTACAGCCGAAAAGTTAGTTTGGCGAACCTAACTTTGGCTTTGCATATAATATGTGTAAGGCTGTCACTGAGATATACTTGGTGGAGAGCTACAAGGTACAC
Clostridium cellulolyticum H10
Ccel_0526 dapA -277 112.1 TATGTAAGATAGAGGTGCGTTTTTTAAGAGTATGGACAATGAGGATTCTGGGGCCTAATGATTTGTTCTGAAAGGGAAAAACGCCGAAGGCAATACTGCACCCCCGAGCAACGTAATGCCTGGTTTCAAGGTCAATAGCCTTGTGACTGTCATCATTTATTATGTGGTGGAGCGCTATCTGTTTA
Clostridium phytofermentans ISDg
null dapA -298 108.2 AACAATTGGTAGAGGTGCATCAATTATCAGTAAACAATCGGATATGTCAGGCATAGATGAGGATTTGTTGAAAGGATGAGATGCCGAAGCTTTAGATATCCTGAGTATGTAAGGCTGGTCGTATGATGAAGAATCATGGGACTGTCATCAAGTTATTGATGGAGAGCTACCTAAAGA
null lysW -312 100.1 ACATTGATAGAGGTGCAACAATTATGAGTACCCCATCCGTAATCAGGCTTTGGATGATGGGAAAGGAATTGCTGCCGAAGTGGTCTTTCGCTGCCTGTGAGTAAAGACTGCTGGTCTAATGCAGAATATGTATCAGACTGTCACATGATATAAAACAAGCAAAGAACAAATCCTTGCTTGTATGTGGAGCGCTATCATTACTGA
Clostridium tetani E88
CTC02456 lysA -247 93.8 TACCCAGGGTAGAGGAGCTATAATTAAGAGTACTTATCTTAAACTGCCAAGTAATGATAGATAGGAAAAGGAATTATAGCCGAAGAAAATAGGGTGGTAATCTATTTTCTGGCTTTGCATAAAATATGTGTAAAGCTGTCACTTTAAAAAGTGTTGAGCTACAGAGGTC
CTC00567 lysW -318 106.4 AGAAAGGTAGAGGCGCGGTATTTAATAGTATCTGTACAGATAAAAGCAAGATGATGTACAGTGAAAGGAAATATCGCCGAAGCATGCAGTTAAAGCTTTGATACTGTATGACTGGTCTTATTTAAAATATGAATAAGATTGTCACAAAATGAATTTGTGGAGAGCTATCATTCAATG
Clostridium acetobutylicum ATCC 824
CAC0608 lysA -279 94.3 CCTTTTGTAGAGGTGCTTTAAGTCAAGAGTAACCGTTTGGAGTTGGCAAACTTAGATGAACGGTAAAAGGGGCTTTTAGCCGAAGCATTTAGATTGGCAGATTTATTTGCTGGCTTTTCATACAACATATGAATGGCTGTCACTTTATTAGTTAGTTATTAGGTAAGTGGAGCGCTACAAGGTACAC
Clostridium botulinum A str. ATCC 3502
CBO3337 lysC -332 95 CTACTTATGGAGAGGTGCTGTAATTAATAGTATTTATTCTTAGTCGGCAGACTTTGAGGAATAAAAAAAGGAATTATGGCCGAAGGAAAAGGTTTGGCAAAAGTTTTTTCTGGCTTTGCACAAAATATGTGTAGGGCTGTCACTTGAAAAAGTGGAGAGCTGCATAGGTA
CBO0421 lysW -334 123 AAGTAGATAGAGGTGCGATGTTAATTAGTACTTTTACGAAGGTAAGCGCTATGAAGTAAAAGGAAAGGGAATATCGCCGAAGTACACAGCTGATGCTTTAAGGTTGTATACTGGGGTTGCATAGAATATGTGTAACACTGTCACAAATTTATTTTGTGGAGAGCTATCATTCAAAG
CBO0250 lysP -305 112.4 ACTGAGGTAGAGGTGCGAATTTTAAGAGTAAAGCTGTGGAGTTAAGCGCTGTGAAACAGTTTGAAAGGAATTTTTGCCGAAGCATACAACTAATGCTTTAATGTTGTATTGCTGGTTTTGTATAAAATATATGCAAGACTGTCACAGAAATAATTTGTGGAGAGCTATCATTTGTTG
Clostridium novyi NT
NT01CX_0133 lysW -307 116.4 GTTTAGTGATAGAGGTGCGGTATTTAAGAGTACTTATGTTGAGGAAAGCACGATGAAGCATAAGGAAAGGAAACATCGCCGAAGTGTATAACCGATGCTTTAAGGTTATATGGCTGGTTTTGCATAAAATATATGTAAGATTGTCACAAATTTTATTTGTGGAGGGCTATCATTCAA
NT01CX_1352 lysA -319 100.3 CCTAAGGTAGAGGTGCTGTAATTAAGAGTATTTACTAGTAGTCGGCAGATTAAGATAAGTAAAAAAAGGGATTACAGCCGAAGATAATCAAATTGGCAAATTTATTATCTGGCGTTATGCATAATATGTATGACGCTGTCATGTTGTTATTAATATGGAGAGCTACAAGGTTACA
NT01CX_2354 lysP -340 110.5 TAACTAAGATAGAGGTGCGAGATTTAAGAGTAGTATTATGGAGTTAAGTGCTAAGAAGTAATAAGAAAGGAAATTTCGCCGAAGCTTATAGATAATACTTTAATGCTATTTGCTGGGCTTACATAAAATATGTGTAAGACTGTCACAAATAAAGTTTGTGGAGAGCTATTATTTTA
Clostridium perfringens ATCC 13124
CPF_2850 lysW -335 110.6 AAAAAGAGGTAGAGGCGCGAGAATCAAGATTACTAAAATGGAGTTAAGTAGCGTAGAAGTTTTAGGAAAGGGATTATCGCCGAAGTTTTTGGCTAATACTTTAAGGCTAAATGCTGGGGTTGTATAGAATATATACAACACTGTCACAAAATGTGGAGAGCTATCATCTTA
CPF_0576 lysA -302 97.5 ACCAAAGTAGAGGTGCCGTAATTAAGAGTAGTCATAAGTAGCTGACAAGTGTTTTATGTATGATGAAAGGGATTATGGCCGAAGAGATATTAATGGTGATTAATATTTCTGGGTATATGTATAATATGCATATAACTGTCACTTTGAAAAAAGTGGAGTGCTACAAGGTACGC
CPF_1369 lysP -301 117.8 TAACTGAGATAGAGGCGCGATGATTAATAGTATCTTTGCAGAGGTAAGCACGTTGAAGCAAAGTGAAAGGATGAATCGCCGAAACCATTAGAAGAGGCTTTAATTCTATTAGGTTGGGGTTGCATAAAATATATGTAACACTGTCACAAATTATTTTGTGGTGTGCTATCATGAAA
Clostridium difficile 630
CD1655 lysW -319 101.8 AGAAGGGTAGAGGCGCAATAATCTATCAGTACTAATAAGGAGTTAAGCACAGAGAGTTATTAGGAAAGGAGATATTGCCGAAGTTTTATAATCGATGCTTTAAGATTATATTGCTGGGGGTACATAGAAAATATGTACAACTGTCACAGGTTTATTTGTGGTGAGCTATCATTTAAGG
CD3224 asd -346 99.8 CCTAGGGTAGAGGTAGCTGTAACTAAGAGTATCCAATAGTAGCTGGCAGGTGTTAATGATTGGAAAAAGGATTTACAGCCGAAGAAAATATTTCTTGCAATAATATTTTCTGGGATTGCACATAACATGTGTAATACTGTCACTTATTTTTGTAGGTGATGAGCTACAGGGTTTAC
CD2054 lysC -251 100.5 AGCCTAGGGTAGAGGTAGCTGTATTCAATAGTATTCAATAGGAGCTGGTAAGCGTTGATAATTGATGAAAGGGTATATAGCCGAAGAAATTTTGTTGACGGACAAATTTTCTGGACTTATGCAGAATATGCATAAGGCTGTCACTTTTAAAGTGGTGAGCTACAAGGTTA
CD3100 COG1288 -309 111.9 AGATTGAGGTAGAGGTTGCATTTACTAAGATTAATATTGAAGAGGTTGGAAACCAATGAGGCAATATAAAAGGAGTAAGTGCCGAAGTGCTAGTGTCCGAAGCTAGTGCTGGGACTGTATTTAATAGGTACAGTACTGTCATCAAAATTATCCCGAATTTTGATGGAGAGCTATCTTAAAC
Clostridium beijerincki NCIMB 8052
Cbei_4787 lysA -487 86.1 GACCTGGGGTAGAGGTGCTGCAATAAATAGTAGGTATGAGGAGTTGGCAAACGTTGATTTATACTAAAAGGTATTACAGCCGAAGAAAATAGATTATTATGCGATAATCTTTTTCTGGGTATTCATAGAATATGTGAATAACTGTCACGAAGAGTGTTGAGCTACAAGGTAC
Cbei_0788 lysP -327 123.8 TAACTAAGATAGAGGCGCGAAATTTAAGAGTATTATTATGGAGGTAAGCTCATTGAAGTAATAAGAAAGGAACTTTCGCCGAAGTAAATAGCTGATTGCTTTAATACTATTTGCTGGGCTTGTGTAAAATATATACAAGACTGCCACAACTTATTTTGTGGAGAGCTATTTTTAAT
Clostridium sp. OhILAs
Clos_0865 yvsH -365 106.9 CGGGTGGGGTAGAGGCGCGGTTGTTAAGAGTACTTATATAAAGGTCGGAAGCCAATGACATATAAGAAAAGGAACTACCGCCGAAGCTTCAGAAACCAAAATCTGTTGCTGGGTCTGTATCGAATAGGTACAGGACTGTCATCATTGTACGAGCTCAGTACTTTGATGTTGCGCTATCTCACAC
Clos_0722 Clos_0722 -333 108.6 GGTGGGGTAGAGGCGCGATTTATATTAGTACCCATGTGGAGGCTGGAAGCCTATGAAATATGGTGAAAGGATACATCGCCGAAGTTTCAGATACCAAAATCTGTTGCTGGGTCTACATCGAATAGGTGTAGGACTGTCATCATTGTACTTGCTCGGTACTTTGATGTTGTGCTATCTCCACGTT
Clostridium sp. L2-50
CLOL250_00644 dapA -227 104.7 AATTCAGTAGAGGCGCGGTATTTATCAGTAAATATATGGATATATATGGAGGTAGATGATATGTGTTGAAAGGGGATACCGCCGAAGGAAGCAGTTATCCATAGAGCTGTAACCTGGTTGTGCAGCGAATAACTGTATGACTGTCATCGTCACAGATGGAGGGCTACTTTTTAAAG
Clostridium scindens ATCC 35704
CLOSCI_01581 lysW -204 78.2 TGGACTTGATAGAGGCGCGGATTTCATCAGTACTCAAAAGCCATAGCCCGGGCGGCTGCTTTAGAGGAAAGGGGAGGCCGCCGAAGGATGTGCATGGCCCGTATGCATGTTCTGGGACGTATGCATAAGATGCTGCGGACTGTCACAACAGTGGAGCGCTATCAGAGTA
Clostridium nexile DSM 1787
CLONEX_03655 lysW -368 108.1 CTAAAAGGATAGAGGTGCGGATTTCATCAGTATTGTGTGGCAAAGTTGGACAGCCGCCACATACGAAAGGGAAAGTCGCCGAAGAGATGTTTTTTTGTCCAGAAAGATATCTCTGGGATATTGCAGAATATGCAATATACTGTCACTTATGTGGAGAGCTATCGTTGGT
Clostridium leptum DSM 753
CLOLEP_03139 asd -320 104.9 CCTAAGATAGAGGTGCGTCTTTAGATGATTAGCTGGTTCGAGGTTGCCGAAACCGCAGACATCCAGTAAAAGGCTTTGGTCGCCGAAGGAAAAGAGTTGGCAGCCCTTTTCCTGGGTGCATTAGCGAACAGCGGTGCAACTGTCATCATGAATTTATGATGGAGAGCTATCTGTGCATT
Clostridium hiranonis DSM 13275
CLOHIR_00818 asd -393 88.9 TAACCTGCGTAGAGGCGCTGTTTTCATCAGTATTGCGAGCTAGTTGGCAAACTTATCTCGTAAGAAAGGGAAAATAGCCGAAGAATTTATCTGGGCACAGATTTTTTCTGGGGTAGTATAAAATATATACTGCACTGTCACTTGTTTAGTGTTGAGCTACAAGGTTT
CLOHIR_01388 lysC -300 81.7 ACCAAGGTAGAGGCGCTATTGTTCAATAGTATCTAGAGGAGTTGGCAGACGTTGAATTTAGAGAAAGGGGATATAGCCGAAGATAGAATGTATGGCAATAATTCTTTCTGGGCCTGTATATAACATATGCAGGACTGTCGCTTTAATAAGTGTTGAGCTACAAGGTTACT
CLOHIR_01339 lysW -275 94.3 TAAATGATAGAGGCGCGGTATTTATCAGTACATAATAACTTAAGCAGGGCAGCTGTTATTATTGAAAGGAAATATCGCCGAAGTTCAGGCTTTGCACCAGGGTCTGTTCTGGGGTATCGTAGAATATGCGATACACTGTCACATCGAGTGGAGCGCTATCTTGGTTAG
Clostridium butyricum 5521
CBY_2257 lysW -425 117.5 CGAAAGAGGTAGAGGCGCAGTATTTAATAGTATTACTACGGAGGAAAGCACTGTGAAGTAGTAAGAAAGGAAATATTGCCGAAGCTTATAACTAATGCTTTAAAGTTATAAGGCTGGGGTTATGCAGAATATGCATAACACTGTCACAAAGATGTGATTTTGTGGTGAGCTATCATTCAT
Clostridium bolteae ATCC BAA-613
CLOBOL_04168 dapA -328 98 ATCATAGAGTAGAGGTTGCGTTGATCATGAGTAGATAAGCCGGATGTGGCAGGCACAGGTGATGGCTTAGGGAAAGGGAGAAACGCCGAAGAGGAAGCGTTCCGTGTTCACGCCCCCTCTGGGCATATGGTTAAGAGCCGTATGACTGTCATCCGGGTGGATGGAGAGCTACCAAAGAA
CLOBOL_04690 alsT -338 79.9 AGGATGCGATAGAGGCGCAGTAAGCATTAGTATCTGTGTGATAATGGATGCCATCCCCAGGGTGGCGGACAGAGGGGATTTTGTCCCGGAGGCCGGCGGGCCGGAGCACACAGGGAAAGGGATTACTGCCGAAACGGATTCTGTCTGCCGGCGGAATGTGTTGGGATGCAGTCTAACAGGCTGCGTACTCTCACTTTTTAAAGTGGTGGCGCTATTGGCTGG
Clostridium bartlettii DSM 16795
CLOBAR_01961 lysC -243 86.2 AACCTAGGGTAGAGGTGCTTTAAAATAAGAGTATTTATAAGGAGCTGGCAAGTTGAGATTTATAAAGAAAGGATTTTAGAGCCGAAGTTGTAAACTTGGCGAAGTTTACTGCTGGACTTATGCATAAGATGTATAAGGCTGTCACTTTTGTGATGAGCTACAAGGTTT
CLOBAR_01794 lysW -263 97.4 AGTAAGGTAGAGGTGCAATATACAATAGTACAAATGACGAGGGAAGCTGATGACTTATTTCGAAAGGGTATGTTGCCGAAGTATATAGGCGATACTTTAAACCTATATAACTGGGGGTATATAAAATATATATATCACTGTCACTAAATGTGGAGAGCTATCAAAACTTA
CLOBAR_00365 asd -341 99.3 TAACCTAAGTAGAGGCGCAATGATTATCAGTAAGTAATATGAGCTGGCGAGTGTAGATGATTACTGAAAGGATGATTTGCCGAAGTTTATATCTTGGCGAAGATATATGCTGGGGTCATGCAGAAAATGCATGAGACTGTCACTTATCTAAGTGGGGGGCTACAGGTTTA
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