Profile of regulator Cobalamin in Chloroflexia
Properties
| Regulator family: |
RF00174 |
| Regulation mode: |
|
| Biological process: |
Cobalamin biosynthesis |
| Effector: |
Adenosylcobalamin |
| Regulog: |
Cobalamin - Chloroflexia |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Chloroflexus aggregans DSM 9485
|
|
Cagg_1279 |
btuR |
-262 |
62.7 |
GCAATTCCATACTCATCGCGGTGACCCGTTAGCCCGGATGCTAGGGCGTAAAGGTGGAAGCTGGTGAAAGTCCAGCGCTGTGTCGCAACTGTAACCGGATGTACTACGCCGGAAGCCAGGACGCCTGCCGCGATGTGTTCTCGTTCA |
|
Cagg_2179 |
cbrX |
-313 |
47.3 |
TGTATCACCCCACCGGTAGGGAGCCCGGAGGAAGCGAAGGGCTTAATTGGGGGAAGTCCGGTCAAAGGCCGGCGCAGTCCACGCTACTGTAGGTCGCCATTGGCGACGAGCCAGAATGCCCGTCCCTACTCGTTCGCTATCAC |
|
Chloroflexus sp. Y-400-fl
|
|
Chy400_2789 |
btuR |
-272 |
62.1 |
CAAGTTCGTAGATCGTCGCGGTGACCCGTTGGCCCGGATGCCAGGGCGTAAAGGTGGAAGCTGGTGAAAGTCCAGCACTGTGCCGCAACTGTAACCGGCTGTTTCAGGCCGGAAGTCAGGACGCCTGCCGCGATGTGTTGTTCGTTC |
|
Chy400_0336 |
btuF |
-421 |
66.1 |
CAAGTTCATATCGTCGCGGTGACCCGTTGGCCCGGATGCCAGGGCGTAAAGGTGGAAGCTGGTGCAAGTCCAGCGCTGTGCCGCAACTGTAACCGGTTAGAAAGCCGGAAGCCAGGACGCCTGCCGCGATGTGATGATGTTCGGC |
|
Chy400_1314 |
cbrX |
-267 |
37.6 |
ATCAGACCTGTCCTGTTGGGGTATGGTCTGAGCAACGGAAGCCGGTCCAAGGCCGGCGCAGTCCACGCTACTGTAGGTCGCGATGAGCGACGAGCCAGAATGCCCGTCCCTACACGTTCGCTTTCA |
|
Roseiflexus castenholzii DSM 13941
|
|
Rcas_0649 |
btuR |
-424 |
61.3 |
TCAATCCAACGACCGTCGCGGTGACCCGCAGGCCCGGATGCCAGGGCGTAAAGGTGGAAGCTGGTGCAAGTCCAGCGCTGTGCCGCAACTGTAACCGGCGATTGTCAGCCGGAAGCCAGGACGCCTGCCGCGATGTCTGTTGTTCAG |
|
Rcas_2247 |
null |
-325 |
64.2 |
CAAGTGAATACCATCGCGGTGACCCGCAGGCCCGGATGCCAGGGCATAAAGGTGGAAGCTGGTGCAAGTCCAGCGCTGTGCCGCAACTGTAACCGGCAATCGTTGCCGGAAGCCAGGACGCCTGCCGCGATGTTGATTGTGTTCGA |
|
Roseiflexus sp. RS-1
|
|
RoseRS_0557 |
btuR |
-361 |
62 |
AATGCAACGACCGTCGCGGTGACCCGCAGGGCCCGGATGCCAGGGCGTAAAGGTGGAAGCTGGTGCAAGTCCAGCGCTGTGCCGCAACTGTAACCGGTTCGTAGTGCCGGAAGCCAGGATGCCTGCCGCGATGTATGTTGTTCAGCC |
|
RoseRS_3085 |
null |
-197 |
65.4 |
CAAGTGAATACCATCGCGGTGACCCGCAGGCCCGGATGCCAGGGCGTAAAGGTGGAAGCTGGTGTAAGTCCAGCGCTGTGCCGCAACTGTAACCGGTGACAATCACCGGAAGCCAGGACGCCTGCCGCGATGTTGAATGTGTTCGA |
|
RoseRS_3103 |
null |
-344 |
63.8 |
TAAACCTTTCAAACGTCGCGGTGACCCGCAGGCCCGGATGCCAGGGCGTAAAGGTGGAAGCTGGTGCAAGTCCAGCGCTGTGCCGCAACTGTAACCGATCGTATCGTCGGAAGCCAGGATGCCTGCCGCGACACTGTGTGTTCGA |
|
Herpetosiphon aurantiacus ATCC 23779
|
|
Haur_3809 |
cbrX |
-213 |
47.7 |
ATCATAAATTGCTATTCAAATGTTGTGCAAACAGTTGGGGGAAATCCGGTGCAAATCCGGTGCAGTCCACGCTACGGTAAGCCTTTGGCCAAGCCCGAATACCCATTGAATAGTTGATTTCTGGGTT |
|
Haur_1060 |
btuR |
-281 |
59.1 |
AATTTACAAGTTTGTTTGTGGTGCGTTGCTGTCCCGGATGACACATACGCGCAATGGGGGAAGCCAGTCTAAGTCTGGCGCTGTCCCGCAACGGTAGGAAGCCCACGCTTCAAGCCCGATAACCCGCCACAAACTCATCGACACTC |
|
Haur_2575 |
nrdA |
-279 |
33.6 |
TACAAATTTTTTTGATCTGAGGCCAAGTGTCGTAGCTTGGCTGGAATATTGGGGAAAGTCCGGTGAGATTCCGGCACTGTCGCGCAACGGTATGGCTCAATGCTAAGTCCGAATGCCCACTCAGTTCGAGTTGATCAAG |
Export
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Regulatory Sites
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[ FASTA format ]
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DOWNLOAD
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