Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator yybP-ykoY in Lactobacillaceae

Properties
Regulator family: RF00080
Regulation mode:
Biological process:
Effector:
Regulog: yybP-ykoY - Lactobacillaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Oenococcus oeni PSU-1
OEOE_1363 atcL -131 28.3 AACTTATTAAATGAGGGAGTAACGGCGAACGATTTCGTTCGCGGGAAATCCAAGTTGCACGAACGAATTGTTCTGGTGACCCTTAATCAGTGAGACTCATCTTAATTTT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
LBUL_0406 atcL -155 48.1 ATCATGTCATAAGGGAGTAACGGCAAGCATAGCTTGCGACAAGCCCAACAGCCGGGAGCCGTGTTGGTTTCCTGGGCTTGTCTTAATTAGTGAGACTTATGTGCTTTTGTT
Lactobacillus acidophilus NCFM
LBA0523 atcL -144 48.2 AACTTGTCATAAGGGAGTAACGGCAATTGCTTGCGATAAATCCAACAGCCGAAGCAAAGATACTTCTGGATTTATCTTAATTTGTGAGACTTATGTGCTACAAGC
LBA1389 atcL -166 42.7 AATATACATATAGGGAGTAACCGACAAATATACTTTGTATTTATGGCGTCATATCACGAAAGCAATTTCCGCTATAAATTTAAATGGTGAGACTATGCATAAACTATC
Lactobacillus johnsonii NCC 533
LJ1731 atcL -126 51.5 CTATAGATGCATAAGAGAGTAACGGCAAGTTATTGCGATAAGTTCAACAACCGAGATGGATATCTCTGGACTTATCTTAATTAGTGAGACTTATGACTGATAA
LJ0957 atcL -172 55.9 AACCAACATATAGGGAGTAACCGGCATAAGGGTGTACTTACGGCGTCAAAACGAAATTAATTTTTCCGCTGTAAGTTTAAATGGTGAGACTATTGGCTAAACTTT
Lactobacillus plantarum WCFS1
lp_0567 atcL -189 64.1 ATACAATCATAAGGGAGTAACTAGCAGAAATATTCTGCGGCAATATCGTCAGCAAGAAGCCAATCCGGTATTGTCTTAAATAGTGAGACTTATGTATGTTCACA
Lactobacillus casei ATCC 334
LSEI_1801 atcL -160 56 TTTAACCAACATAGGGGAGTAACTAGCAGAGTATTCTGCGACAACGTCACCAACAAGGCTATGTCTGGTGTTGTCTTAAATAGTGAGACTTATGGATCTACT
Lactobacillus brevis ATCC 367
LVIS_0947 atcL -181 58.9 CTACAGCAACATAAGGGAGTAACTAGCAGAACGTTTCTGCGGCAATTCCGTCAGCAAGAAGCCAATCCGGGATTGCCTTAAATAGTGAGACTTATGTGTGTTCA
Lactobacillus sakei subsp. sakei 23K
LSA1568 atcL -161 47.9 GAGGTTAACGATAAGGGAGTAACTGGCAGCTTGTCTGCGATAACGCCACCAACAAGGCAATATTCTGGTGTTATCTTAATTAGTGAGACTTATAGGGATTTT
Pediococcus pentosaceus ATCC 25745
PEPE_1523 atcL -173 54.6 AATTGTAGACATGAGGGAGTAACTTGCAGACTATCTGCGATAATATCACCAACAAGAATAAATCTGGTATTATCTTAATTTAGTGAGACTCATGTGTGTGGG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
LEUM_0434 atcL -207 36.6 GTTAATTTCTGAGGGAGTAACTGACGGAATGATCGTGGCTGAATCGTCAAAGCAAAACAGCAATGTTTTATATCGCGCTTTATTGCGCCGGTTTAGCATTAAACAGTGAGACTCATGTAAACACACT
Lactobacillus rhamnosus GG
LGG_01855 atcL -162 56.1 TTTACTCAACATAGGGGAGTAACTAGCAGAGCATATCTGCGACAACGTCACCAACAAGGCTATGTCTGGTGTTGTCTTAAATAGTGAGACTTATGGATCTACT
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