Profile of regulator L20_leader in Thermotogales
Properties
| Regulator family: |
RF00558 |
| Regulation mode: |
|
| Biological process: |
Ribosome biogenesis |
| Effector: |
|
| Regulog: |
L20_leader - Thermotogales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Thermotoga maritima MSB8
|
|
TM1590 |
infC |
-213 |
46 |
AAAGCAAGTGGAGGCCAGCCCGGCTTCCCACCCTGGGGCAAGAGGCTACCAGGGTAAATATCCCTGAAAGATTCAGCTTCAAGGGGAAGCGGGCTTTTTGCCCGCTATTTTTTATGACTGA |
|
Thermotoga sp. RQ2
|
|
TRQ2_1253 |
infC |
-213 |
46 |
AAAGCAAGTGGAGGCCAGCCCGGCTTCCCACCCTGGGGCAAGAGGCTACCAGGGTAAATATCCCTGAAAGATTCAGCTTCAAGGGGAAGCGGGCTTTTTGCCCGCTATTTTTTATGACTGA |
|
Thermotoga neapolitana DSM 4359
|
|
CTN_0869 |
infC |
-115 |
44.2 |
TAAAAGCAAGTGGAGGCCAGCCCGGCTTCCCACCCTGGAGCAGAAGGCTACCAGGGTAAATATCCCTGAGAACATCAGCTTCAAAGGGAAGCGGGCTTTTTGCCCGCTATTTTTTGTGAAG |
|
Thermotoga petrophila RKU-1
|
|
Tpet_1203 |
infC |
-197 |
44.1 |
AAAAAGCAAGTGGAGGCCAGCCCGGCTTCCCACCCTGGAGCAGGAGGCTACCAGGGTAAATATCCCTGAAAGATTCAGCTTCGAGGGGAAGCGGGCTTTTTGCCCGCTATTTTTTATAGTG |
|
Thermotoga naphthophila RKU-10
|
|
Tnap_1218 |
infC |
-137 |
46 |
AAAAAGCAAGTGGAGGCCAGCCCGGCTTCCCACCCTGGGGCAAGAGGCTACCAGGGTAAATATCCCTGAAAGATTCAGCTTCAAGGGGAAGCGGGCTTTTTGCCCGCTATTTTTTATGACT |
|
Thermotoga lettingae TMO
|
|
Tlet_1347 |
infC |
-84 |
32 |
AGAGCAAGAGGAAGCCTTGCTTCCCACCCCGAGACAGAGTCGAAGGGGTTTAAAAAAAATCAGGCCGTAATGGGAGGCGGGCGTTTGCCCGCATATTTTTTTAATAAG |
|
Thermosipho africanus TCF52B
|
|
THA_1200 |
infC |
-233 |
46.4 |
TATAGTAAAGAGGAAGCGCCCGCTTCCCACCCCAAGCGAAAGCGAAGGGGTTATAAAGCAGTAAACGAGGTTTTAGATTAACATTAATAGATGATTAATGTATCGGCGGGCGTTTTGCACGCCGATATTTTTTATGTTAG |
|
Thermosipho melanesiensis BI429
|
|
Tmel_0923 |
infC |
-225 |
38.4 |
TTTTGAAGAGGAAGCGCCCGCTTCCCACCCCAAGCAAAAGTGCGAAGGGGTAGATAGAGCAGGAAATTATATTTGAGGTTAGAAGGAAAATATATGTCGGCGGGCGTTTTTACTCGCCGATAATTTTTTTAGGAGGG |
|
Fervidobacterium nodosum Rt17-B1
|
|
Fnod_0660 |
infC |
-172 |
44.2 |
GTAAAAAGTGGAGGCGCCCGGCTTCCCACCCAACGGCAAAATGCTGTTTGGGTATCAGAAAAGTTAAGTTTGAAAGGTAGAACTGTGATAAATCATAATGTGTTATAAAACAACGGGCGCTTTTGCCCGTTTTTATTTTTTGAAAA |
|
Petrotoga mobilis SJ95
|
|
Pmob_0709 |
infC |
-177 |
27.8 |
AGGTAAAGAGGAAGTCGCCCGTAGTTAACTTCCCACCCCGGGGAACAATCAAAACCGTCAGGGGTACGAATTTTGAAAAAAATGACTCTTTGGTTAGGAAAAGAGAGTTATTTGTGTTTAAGAAGAAATGGGTGACGATCCGTCACCCATTTTTTATATGTTAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
