Profile of regulator L10_leader in Thermotogales
Properties
| Regulator family: |
RF00557 |
| Regulation mode: |
|
| Biological process: |
Ribosome biogenesis |
| Effector: |
|
| Regulog: |
L10_leader - Thermotogales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Thermotoga maritima MSB8
|
|
TM0456 |
rplJ |
-133 |
36.7 |
GAAAACTCAATAAGACGCCGTAGATGGCAGGGCCCGTGGGGTTAAAGATCCTGCCGGAGGCGTCCCAGAAAGGTTCTATGACCTTTTTGTGGACCCTCCGGGGTCCACAAAATTTTTTTGGGAGGTGA |
|
Thermotoga sp. RQ2
|
|
TRQ2_0479 |
rplJ |
-136 |
40.2 |
TCGAAAACTCAATAAGACGCCGTAGATGGCAGGGCCCTTGGGGTTAAAGATCCTGCCGGAGGCGTCCCAGAAAGGTTCTATGACCTTTTTGTGGACCCTCCGGGGTCCACAAAATTTTTTTTGGGAGG |
|
Thermotoga neapolitana DSM 4359
|
|
CTN_0217 |
rplJ |
-137 |
32.3 |
AACAAATAGCCGAGCGACGCCGTAGATGGCAGGTCCCTTTCCGGGTTAAACATCCTGCCGGAGGCGTCCCAAAAGGGCACTAAGGCCTTTTTGTGGACCCTCCGGGGTCCACAAAATTTTTTTGGGAGGT |
|
Thermotoga petrophila RKU-1
|
|
Tpet_0464 |
rplJ |
-136 |
40.2 |
TCGAAAACTCAATAAGACGCCGTAGATGGCAGGGCCCTTGGGGTTAAAGATCCTGCCGGAGGCGTCCCAGAAAGGTTCTATGACCTTTTTGTGGACCCTCCGGGGTCCACAAAATTTTTTTTGGGAGG |
|
Thermotoga naphthophila RKU-10
|
|
Tnap_0238 |
rplJ |
-134 |
40.2 |
GAAAACTCAATAAGACGCCGTAGATGGCAGGGCCCTTGGGGTTAAAGATCCTGCCGGAGGCGTCCCAGAAAGGTTCTATGACCTTTTTGTGGACCCTCCGGGGTCCACAAAATTTTTTTTGGGAGGTG |
|
Thermotoga lettingae TMO
|
|
Tlet_0475 |
rplJ |
-115 |
46.6 |
TGAATAATTGCTTTTCGCCAAAGACAGTAGGTCTATGCTGAAAAAGGGGAGTCCCCGCCTACCGAGGCGAAAGAAACGTTTAATAATATAGTTTCTTTTGCTGCGGGGTCTCTTTTTGAGACCTTTTTTATTGAAAGGAG |
|
Thermosipho africanus TCF52B
|
|
THA_1347 |
rplJ |
-142 |
34.2 |
TGGTAAAATTTAGTCGATGCTGAAGACGGCAGGTTAAATAAAGGCTTATGCCGCCTGCCCGAGGCAGAATGGGAAATATTATTTTCCCATTTGTTGTTGCCTCGGAGTTCCGAGGTTTATTTTTTTGTAG |
|
Thermosipho melanesiensis BI429
|
|
Tmel_0504 |
rplJ |
-141 |
33.9 |
TGTTAAAATCTAACCAGTGCTGAAGACGGCAGGTTAAATAAAGGCAGAAAGCCGCCTGCCCGAGGCAGAAAGGAAAGTGGTTGCTTTCCTTTTTTGCGCCTCGGTATTCCGAGGTTTATTTTTTTGTAGGA |
|
Fervidobacterium nodosum Rt17-B1
|
|
Fnod_1784 |
rplJ |
-163 |
25.1 |
TGGTATATCTCAATGTTTGCCGAAGAATGCAGGTACAAAAAAGACCCAAGTGGTCGCCTGCAGGAGGCACAAAAGAGAAACCCGCTTTTTAGCTGGAGTTCTCTTTTGTTATGCCTCGGAAAGAGGCATTTTTTGTTTTTATT |
|
Petrotoga mobilis SJ95
|
|
Pmob_0357 |
rplJ |
-151 |
42.5 |
AGTAATAACAGATTGCGTGCCAATGAAAGTAGGTCTTTAATGGGTTAAAGAGGCGAAATCTCGCCTACCGAGGTACGCGGATAAAGGAATAATTTTTGTTTCTTTTAGCCGCTACCCATTGCGGCTTTTTTATTTAAGGA |
|
Thermotogales bacterium TBF 19.5.1
|
|
Kole_1840 |
rplJ |
-150 |
41.2 |
AAGTGAAAGTGAATATGTACCGAAGACAGTAGGTTTCTAAAGGTTTTCCATACCGCCTACCGAGGTACGCGGAAAAGATTGAAAGAATAATTTTTCACATATTTCTGCGGCCTCAATGGCCGCTTTTTTTGAAAGGAG |
Export
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Regulatory Sites
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[ FASTA format ]
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