Regulon of LexA in Cupriavidus taiwanensis
| Regulator type: | Transcription factor |
| TF locus tag: | RALTA_A1825 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Ralstonia |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 11 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -62
Score: 5.6 Sequence: GGCTGTATGGATATACAGTT
Locus tag: RALTA_A0247
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -118
Score: 5.4 Sequence: TACTGTATAAAATCACAGCA
Position: -98
Score: 6 Sequence: TACTGTTTAAACATACAGTG
Locus tag: RALTA_A1825
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -88
Score: 6.2 Sequence: TACTGTATATTTGTACAGTT
Locus tag: RALTA_B1170
Name: PF06733 Funciton: DinG family ATP-dependent helicase CPE1197 |
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PF06733
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DinG family ATP-dependent helicase CPE1197
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Position: -68
Score: 6.3 Sequence: CACTGTATATTCATACAGTA
Locus tag: RALTA_A3210
Name: dinD Funciton: DNA-damage-inducible protein, part of SOS response |
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dinD
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DNA-damage-inducible protein, part of SOS response
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Position: -67
Score: 6.4 Sequence: TACTGTATATATTTACAGTA
Position: -48
Score: 5.1 Sequence: ACCTGTATGGATGAACAGTG
Locus tag: RALTA_B0767
Name: BPSS1334 Funciton: Conserved hypothetical protein |
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BPSS1334
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Conserved hypothetical protein
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Position: -159
Score: 6.1 Sequence: TACTGTTTTTTTATACAGTA
Locus tag: RALTA_A0499
Name: recA Funciton: Recombinase A
Locus tag: RALTA_A0500
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -72
Score: 6.3 Sequence: TACTGTATAAATATACAGTT
Locus tag: RALTA_B0872
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: RALTA_B0873
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: RALTA_B0874
Name: dnaE2 Funciton: macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif.
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Position: -41
Score: 6.3 Sequence: AACTGTATAAATATACAGTA
Locus tag: pRALTA_0101
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: pRALTA_0100
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: pRALTA_0099
Name: dnaE2 Funciton: macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif.
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Position: -71
Score: 5.7 Sequence: GACTGTATGGATGTACAGTG
Locus tag: RALTA_B1379
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Position: -42
Score: 6 Sequence: GACTGTATATTCGTACAGTA
Locus tag: RALTA_B2284
Name: H16_B2553 Funciton: Conserved hypothetical protein |
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H16_B2553
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Conserved hypothetical protein
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Position: -33
Score: 5.9 Sequence: TACTGTACATCCATACAGTA
Locus tag: RALTA_A1272
Name: H16_A1352 Funciton: Conserved hypothetical protein |
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H16_A1352
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Conserved hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |