Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Cupriavidus taiwanensis

Properties
Regulator type: Transcription factor
TF locus tag: RALTA_A1825
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Ralstonia
Statistics of regulated genes:
- Genes 16
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 62 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -62
Score: 5.6
Sequence: GGCTGTATGGATATACAGTT
Locus tag: RALTA_A0247
Name: uvrD
Funciton: ATP-dependent DNA helicase II
RALTA_A0247
uvrD
ATP-dependent DNA helicase II
Position: -118
Score: 5.4
Sequence: TACTGTATAAAATCACAGCA
Position: -98
Score: 6
Sequence: TACTGTTTAAACATACAGTG
Locus tag: RALTA_A1825
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
RALTA_A1825
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -88
Score: 6.2
Sequence: TACTGTATATTTGTACAGTT
Locus tag: RALTA_B1170
Name: PF06733
Funciton: DinG family ATP-dependent helicase CPE1197
RALTA_B1170
PF06733
DinG family ATP-dependent helicase CPE1197
Position: -68
Score: 6.3
Sequence: CACTGTATATTCATACAGTA
Locus tag: RALTA_A3210
Name: dinD
Funciton: DNA-damage-inducible protein, part of SOS response
RALTA_A3210
dinD
DNA-damage-inducible protein, part of SOS response
Position: -67
Score: 6.4
Sequence: TACTGTATATATTTACAGTA
Position: -48
Score: 5.1
Sequence: ACCTGTATGGATGAACAGTG
Locus tag: RALTA_B0767
Name: BPSS1334
Funciton: Conserved hypothetical protein
RALTA_B0767
BPSS1334
Conserved hypothetical protein
Position: -159
Score: 6.1
Sequence: TACTGTTTTTTTATACAGTA
Locus tag: RALTA_A0499
Name: recA
Funciton: Recombinase A
Locus tag: RALTA_A0500
Name: recX
Funciton: Regulatory protein RecX
RALTA_A0499
recA
Recombinase A
RALTA_A0500
recX
Regulatory protein RecX
Position: -72
Score: 6.3
Sequence: TACTGTATAAATATACAGTT
Locus tag: RALTA_B0872
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: RALTA_B0873
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: RALTA_B0874
Name: dnaE2
Funciton: macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif.
RALTA_B0872
imuA
Predicted RecA/RadA recombinase
RALTA_B0873
imuB
DNA polymerase-like protein PA0670
RALTA_B0874
dnaE2
macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif.
Position: -41
Score: 6.3
Sequence: AACTGTATAAATATACAGTA
Locus tag: pRALTA_0101
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: pRALTA_0100
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: pRALTA_0099
Name: dnaE2
Funciton: macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif.
pRALTA_0101
imuA
Predicted RecA/RadA recombinase
pRALTA_0100
imuB
DNA polymerase-like protein PA0670
pRALTA_0099
dnaE2
macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif.
Position: -71
Score: 5.7
Sequence: GACTGTATGGATGTACAGTG
Locus tag: RALTA_B1379
Name: uvrA
Funciton: Excinuclease ABC subunit A
RALTA_B1379
uvrA
Excinuclease ABC subunit A
Position: -42
Score: 6
Sequence: GACTGTATATTCGTACAGTA
Locus tag: RALTA_B2284
Name: H16_B2553
Funciton: Conserved hypothetical protein
RALTA_B2284
H16_B2553
Conserved hypothetical protein
Position: -33
Score: 5.9
Sequence: TACTGTACATCCATACAGTA
Locus tag: RALTA_A1272
Name: H16_A1352
Funciton: Conserved hypothetical protein
RALTA_A1272
H16_A1352
Conserved hypothetical protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise