Regulon of BioQ in Nocardioides sp. JS614
| Regulator type: | Transcription factor |
| TF locus tag: | Noca_3348 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Biotin biosynthesis |
| Effector: | Biotin |
| Regulog: | BioQ - Actinomycetales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - BioQ
- By TF family - TetR
- By effector - Biotin
- By pathway - Biotin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -54
Score: 5.2 Sequence: CCTGAACACCGTTCACC
Position: -39
Score: 5.1 Sequence: CCTGACCACCGTTCAGG
Locus tag: Noca_3349
Name: bioY Funciton: Substrate-specific component BioY of biotin ECF transporter
Locus tag: Noca_3350
Name: bioM Funciton: ATPase component BioM of energizing module of biotin ECF transporter
Locus tag: Noca_3351
Name: bioN Funciton: Transmembrane component BioN of energizing module of biotin ECF transporter |
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bioY
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Substrate-specific component BioY of biotin ECF transporter
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bioM
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ATPase component BioM of energizing module of biotin ECF transporter
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bioN
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Transmembrane component BioN of energizing module of biotin ECF transporter
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Position: -95
Score: 5.1 Sequence: CCTGAACGGTGGTCAGG
Position: -80
Score: 5.2 Sequence: GGTGAACGGTGTTCAGG
Locus tag: Noca_3348
Name: bioQ Funciton: biotin repressor, TetR family |
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bioQ
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biotin repressor, TetR family
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Position: -96
Score: 5.2 Sequence: CCTGAACGCTGTTCACC
Position: -81
Score: 5.2 Sequence: CCTGAACGCTGTTCACC
Position: -66
Score: 5.2 Sequence: CCTGAACGCTGTTCACC
Position: -51
Score: 5.2 Sequence: CCTGAACGCTGTTCACC
Position: -36
Score: 5.7 Sequence: CCTGAACGCTGTTCAGG
Locus tag: Noca_3415
Name: bioB Funciton: biotin synthase
Locus tag: Noca_3414
Name: bioA Funciton: adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Locus tag: Noca_3413
Name: bioF Funciton: 8-amino-7-oxononanoate synthase
Locus tag: Noca_3412
Name: bioD Funciton: dethiobiotin synthase |
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bioB
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biotin synthase
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bioA
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adenosylmethionine-8-amino-7-oxononanoate aminotransferase
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bioF
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8-amino-7-oxononanoate synthase
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bioD
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dethiobiotin synthase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |