Regulon of PhoB in Desulfovibrio magneticus RS-1

Properties
Regulator type:	Transcription factor
TF locus tag:	DMR_02640
Regulator family:	OmpR
Regulation mode:	activator
Biological process:	Phosphate metabolism
Effector:	Inorganic phosphate
Regulog:	PhoB - Desulfovibrionales
Statistics of regulated genes:
- Genes	20
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 95 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - OmpR
By effector - Inorganic phosphate
By pathway - Phosphate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -181 Score: 4.6 Sequence: GCGACACCCTGTCGTAAC Position: -170 Score: 3.8 Sequence: TCGTAACCGGCCCGCCAC Locus tag: DMR_33040 Name: null Funciton: PhoU family protein
	DMR_33040		PhoU family protein
Position: -85 Score: 4.1 Sequence: GCGTCACGTAATCGTCGC Locus tag: DMR_13500 Name: null Funciton: diguanylate cyclase/phosphodiesterase
	DMR_13500		diguanylate cyclase/phosphodiesterase
Position: -116 Score: 5.3 Sequence: TTGTCACGAGATTGTCAC Position: -31 Score: 3.9 Sequence: TCGTCACGCTTCTGCCAT Locus tag: DMR_08630 Name: null Funciton: Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) Locus tag: DMR_08640 Name: null Funciton: Phosphate transport regulator (distant homolog of PhoU) Locus tag: DMR_08650 Name: null Funciton: Probable low-affinity inorganic phosphate transporter
	DMR_08630		Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)
	DMR_08640		Phosphate transport regulator (distant homolog of PhoU)
	DMR_08650		Probable low-affinity inorganic phosphate transporter
Position: -65 Score: 4.2 Sequence: ACGCCACGGGTTCGTCAC Locus tag: DMR_08520 Name: null Funciton: Alkaline phosphatase (EC 3.1.3.1) Locus tag: DMR_08530 Name: null Funciton: YibE/F family protein
	DMR_08520		Alkaline phosphatase (EC 3.1.3.1)
	DMR_08530		YibE/F family protein
Position: -292 Score: 4.3 Sequence: TTGTCACGGAAATGTCGC Position: -116 Score: 4.1 Sequence: TTGTCACCGGTTTGCCAT Locus tag: DMR_20230 Name: null Funciton: GGDEF domain protein Locus tag: DMR_20240 Name: pstB Funciton: phosphate import ATP-binding protein PstB Locus tag: DMR_20250 Name: null Funciton: Phosphate transport system regulatory protein PhoU Locus tag: DMR_20260 Name: null Funciton: HPr kinase Locus tag: DMR_20270 Name: null Funciton: protein of unknown function UPF0052 and CofD Locus tag: DMR_20280 Name: corA Funciton: Mg2+ transporter protein, CorA family protein
	DMR_20230		GGDEF domain protein
	DMR_20240	pstB	phosphate import ATP-binding protein PstB
	DMR_20250		Phosphate transport system regulatory protein PhoU
	DMR_20260		HPr kinase
	DMR_20270		protein of unknown function UPF0052 and CofD
	DMR_20280	corA	Mg2+ transporter protein, CorA family protein
Position: -62 Score: 4.2 Sequence: CCGACGCGCTATTGTCAC Locus tag: DMR_24190 Name: null Funciton: Radical SAM domain protein Locus tag: DMR_24180 Name: null Funciton: hypothetical protein
	DMR_24190		Radical SAM domain protein
	DMR_24180		hypothetical protein
Position: -83 Score: 5.5 Sequence: GTGTCACACAATCGTCAC Locus tag: DMR_02640 Name: phoB Funciton: phosphate regulon transcriptional regulator PhoB Locus tag: DMR_02630 Name: null Funciton: PAS/PAC sensor signal transduction histidine kinase
	DMR_02640	phoB	phosphate regulon transcriptional regulator PhoB
	DMR_02630		PAS/PAC sensor signal transduction histidine kinase
Position: -100 Score: 5.2 Sequence: GCGTCACCGGACCGTAAC Locus tag: DMR_38880 Name: pstS Funciton: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) Locus tag: DMR_38870 Name: pstC-2 Funciton: Phosphate transport system permease protein PstC (TC 3.A.1.7.1) Locus tag: DMR_38860 Name: pstA-2 Funciton: Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
	DMR_38880	pstS	Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
	DMR_38870	pstC-2	Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
	DMR_38860	pstA-2	Phosphate transport system permease protein PstA (TC 3.A.1.7.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of PhoB in Desulfovibrio magneticus RS-1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --