Regulon of NikR in Lawsonia intracellularis PHE/MN1-00
| Regulator type: | Transcription factor |
| TF locus tag: | LI1090 |
| Regulator family: | NikR |
| Regulation mode: | repressor |
| Biological process: | Nickel homeostasis |
| Effector: | Nickel ion, (Ni2+) |
| Regulog: | NikR - Desulfovibrionales |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By trascription factor - NikR
- By TF family - NikR
- By effector - Nickel ion, (Ni2+)
- By pathway - Nickel homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -98
Score: 6.5 Sequence: GTATCAT-(13)-GTATTAC
Position: -68
Score: 5.5 Sequence: ATGATAT-(13)-GTTACAC
Locus tag: LI0864
Name: null Funciton: hypothetical protein
Locus tag: LI0863
Name: nikM Funciton: Substrate-specific component NikM of nickel ECF transporter
Locus tag: LI0862
Name: nikQ Funciton: Transmembrane component NikQ of energizing module of nickel ECF transporter
Locus tag: LI0861
Name: nikO Funciton: ATPase component NikO of energizing module of nickel ECF transporter |
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hypothetical protein
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nikM
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Substrate-specific component NikM of nickel ECF transporter
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nikQ
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Transmembrane component NikQ of energizing module of nickel ECF transporter
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nikO
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ATPase component NikO of energizing module of nickel ECF transporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |