Regulon of Fur in Paenibacillus sp. JDR-2
| Regulator type: | Transcription factor |
| TF locus tag: | Pjdr2_2329 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | Fur - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By trascription factor - FUR
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -137
Score: 5.9 Sequence: TATGATAATGATTATCAAC
Locus tag: Pjdr2_0424
Name: ywjA Funciton: Multidrug resistance ABC transporter ATP-binding and permease protein |
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ywjA
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Multidrug resistance ABC transporter ATP-binding and permease protein
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Position: -170
Score: 5 Sequence: GATGATAATATTTCTCACT
Position: -111
Score: 5.2 Sequence: TTTGATAACGATTCTCATA
Locus tag: Pjdr2_4366
Name: yfiZ Funciton: Iron(III) siderophore transport permease
Locus tag: Pjdr2_4367
Name: yfhA Funciton: Iron(III) siderophore transport permease
Locus tag: Pjdr2_4368
Name: yusV Funciton: Iron(III)-siderophore transporter (ATP binding component) |
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yfiZ
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Iron(III) siderophore transport permease
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yfhA
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Iron(III) siderophore transport permease
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yusV
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Iron(III)-siderophore transporter (ATP binding component)
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Position: -315
Score: 5.5 Sequence: ATTGAGAATGGTTATCATG
Position: -285
Score: 6.4 Sequence: ACTGATAATCATTATCAAT
Locus tag: Pjdr2_0481
Name: Pjdr2_0481 Funciton: Hypothetical protein
Locus tag: Pjdr2_0482
Name: ykuP Funciton: Flavodoxin |
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Pjdr2_0481
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Hypothetical protein
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ykuP
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Flavodoxin
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Position: -50
Score: 6.1 Sequence: ATTGATAATAATTATCATA
Locus tag: Pjdr2_0383
Name: yhfQ Funciton: Putative iron(III) dicitrate-binding lipoprotein
Locus tag: Pjdr2_0382
Name: yfmD Funciton: Iron-dicitrate ABC transporter (permease)
Locus tag: Pjdr2_0381
Name: yfmE Funciton: Iron-dicitrate ABC transporter (permease) |
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yhfQ
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Putative iron(III) dicitrate-binding lipoprotein
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yfmD
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Iron-dicitrate ABC transporter (permease)
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yfmE
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Iron-dicitrate ABC transporter (permease)
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Position: -57
Score: 6.1 Sequence: ATTGATAATGATTATCACA
Locus tag: Pjdr2_3247
Name: ycgT Funciton: Thioredoxin reductase (EC 1.8.1.9) |
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ycgT
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Thioredoxin reductase (EC 1.8.1.9)
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Position: -77
Score: 5.1 Sequence: AATTATAATCATTCTAAAT
Locus tag: Pjdr2_1270
Name: fur Funciton: Transcriptional regulator for iron transport and metabolism, Fur family |
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fur
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Transcriptional regulator for iron transport and metabolism, Fur family
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Position: -118
Score: 5.2 Sequence: CCTGAGAACGATTATCATT
Position: -88
Score: 5.3 Sequence: ATTGATAATTGTTATCACG
Locus tag: Pjdr2_5637
Name: fhuC Funciton: Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3) |
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fhuC
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Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
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Position: -84
Score: 6.2 Sequence: ATTGACAATGATTATCATT
Locus tag: Pjdr2_0995
Name: efeM Funciton: lipoprotein binding ferrous or ferric iron for transport
Locus tag: Pjdr2_0996
Name: efeN Funciton: iron-dependent peroxidase convert ferric iron into ferrous iron
Locus tag: Pjdr2_0997
Name: efeU Funciton: ferrous ion permease |
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efeM
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lipoprotein binding ferrous or ferric iron for transport
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efeN
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iron-dependent peroxidase convert ferric iron into ferrous iron
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efeU
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ferrous ion permease
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |