Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Bacillus licheniformis DSM 13

Properties
Regulator type: Transcription factor
TF locus tag: BLi02503
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Bacillales
Statistics of regulated genes:
- Genes 51
- Operons 21
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 200 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -58
Score: 5.6
Sequence: AATGCGAATCATTATCACT
Locus tag: BLi04262
Name: yxeB
Funciton: Fe3+-hydroxamate ABC transporter substrate-binding protein
BLi04262
yxeB
Fe3+-hydroxamate ABC transporter substrate-binding protein
Position: -81
Score: 5.8
Sequence: ATTGAAAATGATTTTCAAG
Locus tag: BLi03474
Name: yfiZ
Funciton: Iron(III) siderophore transport permease
Locus tag: BLi03473
Name: yfhA
Funciton: Iron(III) siderophore transport permease
Locus tag: BLi03472
Name: yusV
Funciton: Iron(III)-siderophore transporter (ATP binding component)
Locus tag: BLi03471
Name: null
Funciton: Uncharacterized Fe-S protein
Locus tag: BLi03470
Name: yusU
Funciton: Hypothetical protein
BLi03474
yfiZ
Iron(III) siderophore transport permease
BLi03473
yfhA
Iron(III) siderophore transport permease
BLi03472
yusV
Iron(III)-siderophore transporter (ATP binding component)
BLi03471
Uncharacterized Fe-S protein
BLi03470
yusU
Hypothetical protein
Position: -36
Score: 4.9
Sequence: ATTAAGAACAATTTTCATT
Locus tag: BLi03393
Name: yumC
Funciton: Ferredoxin--NADP reductase 2
BLi03393
yumC
Ferredoxin--NADP reductase 2
Position: -40
Score: 6
Sequence: AATGATAATGGTTCTCAAT
Locus tag: BLi02271
Name: exlX
Funciton: Extracellular endoglucanase precursor (expansin)
BLi02271
exlX
Extracellular endoglucanase precursor (expansin)
Position: -108
Score: 6.2
Sequence: ATTGATAATCATTTTCAGT
Locus tag: BLi01925
Name: miaB
Funciton: (dimethylallyl)adenosine tRNA methylthiotransferase
Locus tag: BLi01926
Name: ymcA
Funciton: Uncharacterized protein involved in biofilm formation
BLi01925
miaB
(dimethylallyl)adenosine tRNA methylthiotransferase
BLi01926
ymcA
Uncharacterized protein involved in biofilm formation
Position: -73
Score: 6.7
Sequence: ATTGATAATCATTATCATT
Position: -35
Score: 6.5
Sequence: AATGAAAATCATTATCAAT
Locus tag: BLi01629
Name: ykuN
Funciton: Flavodoxin
Locus tag: BLi01630
Name: ykuO
Funciton: BNR-repeat containing protein
Locus tag: BLi01631
Name: ykuP
Funciton: Flavodoxin
BLi01629
ykuN
Flavodoxin
BLi01630
ykuO
BNR-repeat containing protein
BLi01631
ykuP
Flavodoxin
Position: -77
Score: 6.7
Sequence: AATGATAATGATTATCATT
Locus tag: BLi01111
Name: yhfQ
Funciton: Putative iron(III) dicitrate-binding lipoprotein
Locus tag: BLi01112
Name: yfmD
Funciton: Iron-dicitrate ABC transporter (permease)
Locus tag: BLi01113
Name: yfmE
Funciton: Iron-dicitrate ABC transporter (permease)
BLi01111
yhfQ
Putative iron(III) dicitrate-binding lipoprotein
BLi01112
yfmD
Iron-dicitrate ABC transporter (permease)
BLi01113
yfmE
Iron-dicitrate ABC transporter (permease)
Position: -90
Score: 5.8
Sequence: CTTGAAAATCATTTTCAAT
Locus tag: BLi03475
Name: yfiY
Funciton: ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component
BLi03475
yfiY
ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component
Position: -33
Score: 6.5
Sequence: AATGATAATCATTTTCATT
Locus tag: BLi00873
Name: yfhC
Funciton: Putative nitroreductase family protein
BLi00873
yfhC
Putative nitroreductase family protein
Position: -46
Score: 6.4
Sequence: ATTGATAATGATaATCAtT
Locus tag: BLi00463
Name: yclN
Funciton: Iron compound ABC uptake transporter permease protein
Locus tag: BLi00464
Name: yclO
Funciton: Iron compound ABC uptake transporter permease protein
Locus tag: BLi00465
Name: yclP
Funciton: Iron compound ABC uptake transporter ATP-binding protein
Locus tag: BLi00466
Name: yclQ
Funciton: Iron compound ABC uptake transporter substrate-binding protein
BLi00463
yclN
Iron compound ABC uptake transporter permease protein
BLi00464
yclO
Iron compound ABC uptake transporter permease protein
BLi00465
yclP
Iron compound ABC uptake transporter ATP-binding protein
BLi00466
yclQ
Iron compound ABC uptake transporter substrate-binding protein
Position: -241
Score: 6.3
Sequence: AATGATTATCATTATCATT
Position: -41
Score: 6
Sequence: AATGAAAATGATTATCAAC
Locus tag: BLi02811
Name: nikA
Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Locus tag: BLi02812
Name: nikB
Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
Locus tag: BLi02813
Name: nikC
Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
Locus tag: BLi02814
Name: nikD
Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Locus tag: BLi02815
Name: nikE
Funciton: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
BLi02811
nikA
Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
BLi02812
nikB
Nickel transport system permease protein NikB (TC 3.A.1.5.3)
BLi02813
nikC
Nickel transport system permease protein NikC (TC 3.A.1.5.3)
BLi02814
nikD
Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
BLi02815
nikE
Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
Position: -119
Score: 5
Sequence: ATTTATAATGATTATTAAA
Position: -79
Score: 4.9
Sequence: ATTTATAATGATTATAGTT
Locus tag: BLi02503
Name: fur
Funciton: Transcriptional regulator for iron transport and metabolism, Fur family
BLi02503
fur
Transcriptional regulator for iron transport and metabolism, Fur family
Position: -53
Score: 5.8
Sequence: ATTGATAATGATTCTCTTT
Locus tag: BLi02658
Name: fhuD
Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
BLi02658
fhuD
Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
Position: -46
Score: 5.5
Sequence: AATGATAATCGTTATCGGT
Locus tag: BLi03521
Name: fhuB
Funciton: Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
Locus tag: BLi03520
Name: fhuG
Funciton: Ferrichrome transport system permease protein FhuG
Locus tag: BLi03519
Name: fhuC
Funciton: Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
BLi03521
fhuB
Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
BLi03520
fhuG
Ferrichrome transport system permease protein FhuG
BLi03519
fhuC
Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
Position: -302
Score: 5.1
Sequence: TATCATTATGATTTTCATT
Position: -41
Score: 6.1
Sequence: ATTGATAATAGTTATCAAT
Locus tag: BLi03906
Name: feuA
Funciton: Fe3+-bacillibactin ABC transporter substrate-binding protein
Locus tag: BLi03905
Name: feuB
Funciton: Fe3+-bacillibactin ABC transporter permease
Locus tag: BLi03904
Name: feuC
Funciton: Fe3+-bacillibactin ABC transporter permease
Locus tag: BLi03903
Name: besA
Funciton: Trilactone hydrolase [bacillibactin] siderophore
BLi03906
feuA
Fe3+-bacillibactin ABC transporter substrate-binding protein
BLi03905
feuB
Fe3+-bacillibactin ABC transporter permease
BLi03904
feuC
Fe3+-bacillibactin ABC transporter permease
BLi03903
besA
Trilactone hydrolase [bacillibactin] siderophore
Position: -307
Score: 6.5
Sequence: ATTGAAAATGATTATCATT
Position: -277
Score: 5.4
Sequence: GATGATAAACATTCTCATT
Locus tag: BLi02343
Name: ypbR
Funciton: Putative GTP-binding protein
BLi02343
ypbR
Putative GTP-binding protein
Position: -207
Score: 6.7
Sequence: ATTGATAATGATTATCAAT
Locus tag: BLi00541
Name: ydbN
Funciton: Hypothetical protein
BLi00541
ydbN
Hypothetical protein
Position: -88
Score: 6.4
Sequence: AATGATTATCATTATCAAT
Locus tag: BLi03902
Name: dhbA
Funciton: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28)
Locus tag: BLi03901
Name: dhbC
Funciton: Isochorismate synthase (EC 5.4.4.2)
Locus tag: BLi03900
Name: dhbE
Funciton: 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58)
Locus tag: BLi03899
Name: dhbB
Funciton: Isochorismatase (EC 3.3.2.1)
Locus tag: BLi03898
Name: dhbF
Funciton: Siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase
BLi03902
dhbA
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28)
BLi03901
dhbC
Isochorismate synthase (EC 5.4.4.2)
BLi03900
dhbE
2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58)
BLi03899
dhbB
Isochorismatase (EC 3.3.2.1)
BLi03898
dhbF
Siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase
Position: -42
Score: 5.9
Sequence: TATGATAACGATTATCATT
Locus tag: BLi04266
Name: feoA
Funciton: Ferrous iron uptake system protein A
BLi04266
feoA
Ferrous iron uptake system protein A
Position: -35
Score: 6.2
Sequence: AATGATAATCTTTATCAAT
Locus tag: BLi01183
Name: dat
Funciton: Siderophore biosynthesis diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76)
Locus tag: BLi01184
Name: ddc
Funciton: Siderophore biosynthesis L-2,4-diaminobutyrate decarboxylase
Locus tag: BLi01185
Name: rhbC
Funciton: Rhizobactin siderophore biosynthesis protein
Locus tag: BLi01186
Name: rhbD
Funciton: Siderophore synthetase small component, acetyltransferase
Locus tag: BLi01187
Name: iucD
Funciton: Possible L-lysine 6-monooxygenase (NADPH)
Locus tag: BLi01188
Name: rhbF
Funciton: Siderophore synthetase component, ligase
BLi01183
dat
Siderophore biosynthesis diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76)
BLi01184
ddc
Siderophore biosynthesis L-2,4-diaminobutyrate decarboxylase
BLi01185
rhbC
Rhizobactin siderophore biosynthesis protein
BLi01186
rhbD
Siderophore synthetase small component, acetyltransferase
BLi01187
iucD
Possible L-lysine 6-monooxygenase (NADPH)
BLi01188
rhbF
Siderophore synthetase component, ligase
Position: -143
Score: 5.2
Sequence: TGTGATAAGCATTCTCAAT
Locus tag: BLi02443
Name: fer
Funciton: Ferredoxin
BLi02443
fer
Ferredoxin
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise