Regulon of Fur in Bacillus licheniformis DSM 13
| Regulator type: | Transcription factor |
| TF locus tag: | BLi02503 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | Fur - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 51 |
| - Operons | 21 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By trascription factor - FUR
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -58
Score: 5.6 Sequence: AATGCGAATCATTATCACT
Locus tag: BLi04262
Name: yxeB Funciton: Fe3+-hydroxamate ABC transporter substrate-binding protein |
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yxeB
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Fe3+-hydroxamate ABC transporter substrate-binding protein
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Position: -81
Score: 5.8 Sequence: ATTGAAAATGATTTTCAAG
Locus tag: BLi03474
Name: yfiZ Funciton: Iron(III) siderophore transport permease
Locus tag: BLi03473
Name: yfhA Funciton: Iron(III) siderophore transport permease
Locus tag: BLi03472
Name: yusV Funciton: Iron(III)-siderophore transporter (ATP binding component)
Locus tag: BLi03471
Name: null Funciton: Uncharacterized Fe-S protein
Locus tag: BLi03470
Name: yusU Funciton: Hypothetical protein |
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yfiZ
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Iron(III) siderophore transport permease
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yfhA
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Iron(III) siderophore transport permease
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yusV
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Iron(III)-siderophore transporter (ATP binding component)
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Uncharacterized Fe-S protein
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yusU
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Hypothetical protein
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Position: -36
Score: 4.9 Sequence: ATTAAGAACAATTTTCATT
Locus tag: BLi03393
Name: yumC Funciton: Ferredoxin--NADP reductase 2 |
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yumC
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Ferredoxin--NADP reductase 2
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Position: -40
Score: 6 Sequence: AATGATAATGGTTCTCAAT
Locus tag: BLi02271
Name: exlX Funciton: Extracellular endoglucanase precursor (expansin) |
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exlX
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Extracellular endoglucanase precursor (expansin)
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Position: -108
Score: 6.2 Sequence: ATTGATAATCATTTTCAGT
Locus tag: BLi01925
Name: miaB Funciton: (dimethylallyl)adenosine tRNA methylthiotransferase
Locus tag: BLi01926
Name: ymcA Funciton: Uncharacterized protein involved in biofilm formation |
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miaB
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(dimethylallyl)adenosine tRNA methylthiotransferase
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ymcA
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Uncharacterized protein involved in biofilm formation
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Position: -73
Score: 6.7 Sequence: ATTGATAATCATTATCATT
Position: -35
Score: 6.5 Sequence: AATGAAAATCATTATCAAT
Locus tag: BLi01629
Name: ykuN Funciton: Flavodoxin
Locus tag: BLi01630
Name: ykuO Funciton: BNR-repeat containing protein
Locus tag: BLi01631
Name: ykuP Funciton: Flavodoxin |
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ykuN
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Flavodoxin
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ykuO
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BNR-repeat containing protein
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ykuP
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Flavodoxin
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Position: -77
Score: 6.7 Sequence: AATGATAATGATTATCATT
Locus tag: BLi01111
Name: yhfQ Funciton: Putative iron(III) dicitrate-binding lipoprotein
Locus tag: BLi01112
Name: yfmD Funciton: Iron-dicitrate ABC transporter (permease)
Locus tag: BLi01113
Name: yfmE Funciton: Iron-dicitrate ABC transporter (permease) |
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yhfQ
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Putative iron(III) dicitrate-binding lipoprotein
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yfmD
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Iron-dicitrate ABC transporter (permease)
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yfmE
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Iron-dicitrate ABC transporter (permease)
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Position: -90
Score: 5.8 Sequence: CTTGAAAATCATTTTCAAT
Locus tag: BLi03475
Name: yfiY Funciton: ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component |
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yfiY
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ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component
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Position: -33
Score: 6.5 Sequence: AATGATAATCATTTTCATT
Locus tag: BLi00873
Name: yfhC Funciton: Putative nitroreductase family protein |
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yfhC
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Putative nitroreductase family protein
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Position: -46
Score: 6.4 Sequence: ATTGATAATGATaATCAtT
Locus tag: BLi00463
Name: yclN Funciton: Iron compound ABC uptake transporter permease protein
Locus tag: BLi00464
Name: yclO Funciton: Iron compound ABC uptake transporter permease protein
Locus tag: BLi00465
Name: yclP Funciton: Iron compound ABC uptake transporter ATP-binding protein
Locus tag: BLi00466
Name: yclQ Funciton: Iron compound ABC uptake transporter substrate-binding protein |
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yclN
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Iron compound ABC uptake transporter permease protein
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yclO
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Iron compound ABC uptake transporter permease protein
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yclP
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Iron compound ABC uptake transporter ATP-binding protein
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yclQ
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Iron compound ABC uptake transporter substrate-binding protein
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Position: -241
Score: 6.3 Sequence: AATGATTATCATTATCATT
Position: -41
Score: 6 Sequence: AATGAAAATGATTATCAAC
Locus tag: BLi02811
Name: nikA Funciton: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Locus tag: BLi02812
Name: nikB Funciton: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
Locus tag: BLi02813
Name: nikC Funciton: Nickel transport system permease protein NikC (TC 3.A.1.5.3)
Locus tag: BLi02814
Name: nikD Funciton: Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
Locus tag: BLi02815
Name: nikE Funciton: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3) |
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nikA
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Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
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nikB
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Nickel transport system permease protein NikB (TC 3.A.1.5.3)
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nikC
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Nickel transport system permease protein NikC (TC 3.A.1.5.3)
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nikD
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Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3)
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nikE
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Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
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Position: -119
Score: 5 Sequence: ATTTATAATGATTATTAAA
Position: -79
Score: 4.9 Sequence: ATTTATAATGATTATAGTT
Locus tag: BLi02503
Name: fur Funciton: Transcriptional regulator for iron transport and metabolism, Fur family |
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fur
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Transcriptional regulator for iron transport and metabolism, Fur family
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Position: -53
Score: 5.8 Sequence: ATTGATAATGATTCTCTTT
Locus tag: BLi02658
Name: fhuD Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3) |
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fhuD
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Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
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Position: -46
Score: 5.5 Sequence: AATGATAATCGTTATCGGT
Locus tag: BLi03521
Name: fhuB Funciton: Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
Locus tag: BLi03520
Name: fhuG Funciton: Ferrichrome transport system permease protein FhuG
Locus tag: BLi03519
Name: fhuC Funciton: Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3) |
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fhuB
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Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
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fhuG
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Ferrichrome transport system permease protein FhuG
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fhuC
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Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
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Position: -302
Score: 5.1 Sequence: TATCATTATGATTTTCATT
Position: -41
Score: 6.1 Sequence: ATTGATAATAGTTATCAAT
Locus tag: BLi03906
Name: feuA Funciton: Fe3+-bacillibactin ABC transporter substrate-binding protein
Locus tag: BLi03905
Name: feuB Funciton: Fe3+-bacillibactin ABC transporter permease
Locus tag: BLi03904
Name: feuC Funciton: Fe3+-bacillibactin ABC transporter permease
Locus tag: BLi03903
Name: besA Funciton: Trilactone hydrolase [bacillibactin] siderophore |
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feuA
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Fe3+-bacillibactin ABC transporter substrate-binding protein
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feuB
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Fe3+-bacillibactin ABC transporter permease
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feuC
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Fe3+-bacillibactin ABC transporter permease
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besA
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Trilactone hydrolase [bacillibactin] siderophore
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Position: -307
Score: 6.5 Sequence: ATTGAAAATGATTATCATT
Position: -277
Score: 5.4 Sequence: GATGATAAACATTCTCATT
Locus tag: BLi02343
Name: ypbR Funciton: Putative GTP-binding protein |
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ypbR
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Putative GTP-binding protein
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Position: -207
Score: 6.7 Sequence: ATTGATAATGATTATCAAT
Locus tag: BLi00541
Name: ydbN Funciton: Hypothetical protein |
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ydbN
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Hypothetical protein
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Position: -88
Score: 6.4 Sequence: AATGATTATCATTATCAAT
Locus tag: BLi03902
Name: dhbA Funciton: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28)
Locus tag: BLi03901
Name: dhbC Funciton: Isochorismate synthase (EC 5.4.4.2)
Locus tag: BLi03900
Name: dhbE Funciton: 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58)
Locus tag: BLi03899
Name: dhbB Funciton: Isochorismatase (EC 3.3.2.1)
Locus tag: BLi03898
Name: dhbF Funciton: Siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase |
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dhbA
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2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28)
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dhbC
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Isochorismate synthase (EC 5.4.4.2)
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dhbE
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2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58)
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dhbB
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Isochorismatase (EC 3.3.2.1)
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dhbF
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Siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase
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Position: -42
Score: 5.9 Sequence: TATGATAACGATTATCATT
Locus tag: BLi04266
Name: feoA Funciton: Ferrous iron uptake system protein A |
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feoA
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Ferrous iron uptake system protein A
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Position: -35
Score: 6.2 Sequence: AATGATAATCTTTATCAAT
Locus tag: BLi01183
Name: dat Funciton: Siderophore biosynthesis diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76)
Locus tag: BLi01184
Name: ddc Funciton: Siderophore biosynthesis L-2,4-diaminobutyrate decarboxylase
Locus tag: BLi01185
Name: rhbC Funciton: Rhizobactin siderophore biosynthesis protein
Locus tag: BLi01186
Name: rhbD Funciton: Siderophore synthetase small component, acetyltransferase
Locus tag: BLi01187
Name: iucD Funciton: Possible L-lysine 6-monooxygenase (NADPH)
Locus tag: BLi01188
Name: rhbF Funciton: Siderophore synthetase component, ligase |
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dat
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Siderophore biosynthesis diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76)
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ddc
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Siderophore biosynthesis L-2,4-diaminobutyrate decarboxylase
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rhbC
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Rhizobactin siderophore biosynthesis protein
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rhbD
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Siderophore synthetase small component, acetyltransferase
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iucD
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Possible L-lysine 6-monooxygenase (NADPH)
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rhbF
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Siderophore synthetase component, ligase
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Position: -143
Score: 5.2 Sequence: TGTGATAAGCATTCTCAAT
Locus tag: BLi02443
Name: fer Funciton: Ferredoxin |
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fer
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Ferredoxin
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |