Regulon of Fur in Bacillus amyloliquefaciens FZB42

Properties
Regulator type:	Transcription factor
TF locus tag:	RBAM_021640
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Bacillales
Statistics of regulated genes:
- Genes	36
- Operons	21
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 200 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -111 Score: 5.3 Sequence: ATTGATTCTTATTCTCAAT Locus tag: RBAM_016850 Name: miaB Funciton: (dimethylallyl)adenosine tRNA methylthiotransferase Locus tag: RBAM_016860 Name: ymcA Funciton: Uncharacterized protein involved in biofilm formation
	RBAM_016850	miaB	(dimethylallyl)adenosine tRNA methylthiotransferase
	RBAM_016860	ymcA	Uncharacterized protein involved in biofilm formation
Position: -70 Score: 6.5 Sequence: AATGAAAATCATTATCATT Position: -33 Score: 6.5 Sequence: AATGAAAATCATTATCAAT Locus tag: RBAM_013920 Name: ykuN Funciton: Flavodoxin Locus tag: RBAM_013930 Name: ykuO Funciton: BNR-repeat containing protein Locus tag: RBAM_013940 Name: ykuP Funciton: Flavodoxin
	RBAM_013920	ykuN	Flavodoxin
	RBAM_013930	ykuO	BNR-repeat containing protein
	RBAM_013940	ykuP	Flavodoxin
Position: -118 Score: 4.8 Sequence: TTTTAGAATGATTATCACA Locus tag: RBAM_021640 Name: fur Funciton: Transcriptional regulator for iron transport and metabolism, Fur family
	RBAM_021640	fur	Transcriptional regulator for iron transport and metabolism, Fur family
Position: -50 Score: 5.6 Sequence: AATGATAACAGTTATCATT Locus tag: RBAM_002130 Name: btr Funciton: Transcriptional regulator of Fe-bacillibactin uptake, AraC family
	RBAM_002130	btr	Transcriptional regulator of Fe-bacillibactin uptake, AraC family
Position: -60 Score: 6.1 Sequence: ATTGATATTGATTCTCAAT Locus tag: RBAM_003480 Name: ycgT Funciton: Thioredoxin reductase (EC 1.8.1.9)
	RBAM_003480	ycgT	Thioredoxin reductase (EC 1.8.1.9)
Position: -87 Score: 5.9 Sequence: GTTGATAATGATAATCATT Locus tag: RBAM_004050 Name: yclN Funciton: Iron compound ABC uptake transporter permease protein Locus tag: RBAM_004060 Name: yclO Funciton: Iron compound ABC uptake transporter permease protein Locus tag: RBAM_004070 Name: yclP Funciton: Iron compound ABC uptake transporter ATP-binding protein Locus tag: RBAM_004080 Name: yclQ Funciton: Iron compound ABC uptake transporter substrate-binding protein
	RBAM_004050	yclN	Iron compound ABC uptake transporter permease protein
	RBAM_004060	yclO	Iron compound ABC uptake transporter permease protein
	RBAM_004070	yclP	Iron compound ABC uptake transporter ATP-binding protein
	RBAM_004080	yclQ	Iron compound ABC uptake transporter substrate-binding protein
Position: -40 Score: 6.5 Sequence: AATGATAATCATTTTCATT Locus tag: RBAM_008550 Name: yfhC Funciton: Putative nitroreductase family protein
	RBAM_008550	yfhC	Putative nitroreductase family protein
Position: -72 Score: 6.4 Sequence: AATGATAATGAATATCATT Locus tag: RBAM_010510 Name: yhfQ Funciton: Putative iron(III) dicitrate-binding lipoprotein
	RBAM_010510	yhfQ	Putative iron(III) dicitrate-binding lipoprotein
Position: -187 Score: 6.7 Sequence: AATGATAATGATTATCAAT Position: -51 Score: 5.5 Sequence: ACTGATAATGATTCTCTTT Locus tag: RBAM_030440 Name: fhuD Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
	RBAM_030440	fhuD	Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
Position: -185 Score: 5.5 Sequence: AAAGAGAATCATTATCAGT Position: -49 Score: 6.7 Sequence: ATTGATAATCATTATCATT Locus tag: RBAM_030430 Name: fhuB Funciton: Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3) Locus tag: RBAM_030420 Name: fhuG Funciton: Ferrichrome transport system permease protein FhuG Locus tag: RBAM_030410 Name: fhuC Funciton: Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
	RBAM_030430	fhuB	Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
	RBAM_030420	fhuG	Ferrichrome transport system permease protein FhuG
	RBAM_030410	fhuC	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
Position: -38 Score: 6.1 Sequence: ATTGATAATAGTTATCAAT Locus tag: RBAM_002120 Name: feuA Funciton: Fe3+-bacillibactin ABC transporter substrate-binding protein Locus tag: RBAM_002110 Name: feuB Funciton: Fe3+-bacillibactin ABC transporter permease Locus tag: RBAM_002100 Name: feuC Funciton: Fe3+-bacillibactin ABC transporter permease Locus tag: RBAM_002090 Name: ybbA Funciton: Putative iron-chelator esterase
	RBAM_002120	feuA	Fe3+-bacillibactin ABC transporter substrate-binding protein
	RBAM_002110	feuB	Fe3+-bacillibactin ABC transporter permease
	RBAM_002100	feuC	Fe3+-bacillibactin ABC transporter permease
	RBAM_002090	ybbA	Putative iron-chelator esterase
Position: -61 Score: 6.5 Sequence: ATTGAAAATCATTATCAAT Locus tag: RBAM_029060 Name: besA Funciton: Trilactone hydrolase [bacillibactin] siderophore
	RBAM_029060	besA	Trilactone hydrolase [bacillibactin] siderophore
Position: -141 Score: 5.2 Sequence: TGTGATAAGCATTCTCAAT Locus tag: RBAM_021190 Name: fer Funciton: Ferredoxin
	RBAM_021190	fer	Ferredoxin
Position: -349 Score: 6.2 Sequence: ATTGAAAATCATTCTCAAT Position: -314 Score: 5.8 Sequence: TATGAAAATGATTCTCATT Locus tag: RBAM_020180 Name: ypbR Funciton: Putative GTP-binding protein
	RBAM_020180	ypbR	Putative GTP-binding protein
Position: -208 Score: 6.1 Sequence: ACTGATAATGATTCTCAAT Locus tag: RBAM_004860 Name: ydbN Funciton: Hypothetical protein
	RBAM_004860	ydbN	Hypothetical protein
Position: -53 Score: 6.7 Sequence: AATGATAATCATTATCAAT Locus tag: RBAM_029050 Name: dhbA Funciton: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28) Locus tag: RBAM_029040 Name: dhbC Funciton: Isochorismate synthase (EC 5.4.4.2) Locus tag: RBAM_029030 Name: dhbE Funciton: 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58) Locus tag: RBAM_029020 Name: dhbB Funciton: Isochorismatase (EC 3.3.2.1) Locus tag: RBAM_029010 Name: dhbF Funciton: Siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase
	RBAM_029050	dhbA	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28)
	RBAM_029040	dhbC	Isochorismate synthase (EC 5.4.4.2)
	RBAM_029030	dhbE	2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58)
	RBAM_029020	dhbB	Isochorismatase (EC 3.3.2.1)
	RBAM_029010	dhbF	Siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase
Position: -47 Score: 5.7 Sequence: ATTGAGAAATATTATCATT Locus tag: RBAM_034370 Name: ywjA Funciton: Multidrug resistance ABC transporter ATP-binding and permease protein
	RBAM_034370	ywjA	Multidrug resistance ABC transporter ATP-binding and permease protein
Position: -124 Score: 5.5 Sequence: ATTGATAATGATATTCAGA Locus tag: RBAM_030060 Name: yusV Funciton: Iron(III)-siderophore transporter (ATP binding component)
	RBAM_030060	yusV	Iron(III)-siderophore transporter (ATP binding component)
Position: -35 Score: 5.2 Sequence: ATTAATAACAATTTTCAAT Locus tag: RBAM_029160 Name: yumC Funciton: Ferredoxin--NADP reductase 2
	RBAM_029160	yumC	Ferredoxin--NADP reductase 2
Position: -36 Score: 6.5 Sequence: AATGATAATCATTATCACT Locus tag: RBAM_036560 Name: yxeB Funciton: Fe3+-hydroxamate ABC transporter substrate-binding protein
	RBAM_036560	yxeB	Fe3+-hydroxamate ABC transporter substrate-binding protein
Position: -47 Score: 5.8 Sequence: TTTGAGAATCATTTTCATT Locus tag: RBAM_007300 Name: yetG Funciton: Putative monooxygenase
	RBAM_007300	yetG	Putative monooxygenase

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Bacillus amyloliquefaciens FZB42

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --