Regulon of Fur in Bacillus amyloliquefaciens FZB42
| Regulator type: | Transcription factor |
| TF locus tag: | RBAM_021640 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | Fur - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 36 |
| - Operons | 21 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By trascription factor - FUR
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -111
Score: 5.3 Sequence: ATTGATTCTTATTCTCAAT
Locus tag: RBAM_016850
Name: miaB Funciton: (dimethylallyl)adenosine tRNA methylthiotransferase
Locus tag: RBAM_016860
Name: ymcA Funciton: Uncharacterized protein involved in biofilm formation |
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miaB
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(dimethylallyl)adenosine tRNA methylthiotransferase
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ymcA
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Uncharacterized protein involved in biofilm formation
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Position: -70
Score: 6.5 Sequence: AATGAAAATCATTATCATT
Position: -33
Score: 6.5 Sequence: AATGAAAATCATTATCAAT
Locus tag: RBAM_013920
Name: ykuN Funciton: Flavodoxin
Locus tag: RBAM_013930
Name: ykuO Funciton: BNR-repeat containing protein
Locus tag: RBAM_013940
Name: ykuP Funciton: Flavodoxin |
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ykuN
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Flavodoxin
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ykuO
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BNR-repeat containing protein
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ykuP
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Flavodoxin
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Position: -118
Score: 4.8 Sequence: TTTTAGAATGATTATCACA
Locus tag: RBAM_021640
Name: fur Funciton: Transcriptional regulator for iron transport and metabolism, Fur family |
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fur
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Transcriptional regulator for iron transport and metabolism, Fur family
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Position: -50
Score: 5.6 Sequence: AATGATAACAGTTATCATT
Locus tag: RBAM_002130
Name: btr Funciton: Transcriptional regulator of Fe-bacillibactin uptake, AraC family |
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btr
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Transcriptional regulator of Fe-bacillibactin uptake, AraC family
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Position: -60
Score: 6.1 Sequence: ATTGATATTGATTCTCAAT
Locus tag: RBAM_003480
Name: ycgT Funciton: Thioredoxin reductase (EC 1.8.1.9) |
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ycgT
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Thioredoxin reductase (EC 1.8.1.9)
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Position: -87
Score: 5.9 Sequence: GTTGATAATGATAATCATT
Locus tag: RBAM_004050
Name: yclN Funciton: Iron compound ABC uptake transporter permease protein
Locus tag: RBAM_004060
Name: yclO Funciton: Iron compound ABC uptake transporter permease protein
Locus tag: RBAM_004070
Name: yclP Funciton: Iron compound ABC uptake transporter ATP-binding protein
Locus tag: RBAM_004080
Name: yclQ Funciton: Iron compound ABC uptake transporter substrate-binding protein |
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yclN
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Iron compound ABC uptake transporter permease protein
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yclO
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Iron compound ABC uptake transporter permease protein
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yclP
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Iron compound ABC uptake transporter ATP-binding protein
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yclQ
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Iron compound ABC uptake transporter substrate-binding protein
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Position: -40
Score: 6.5 Sequence: AATGATAATCATTTTCATT
Locus tag: RBAM_008550
Name: yfhC Funciton: Putative nitroreductase family protein |
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yfhC
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Putative nitroreductase family protein
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Position: -72
Score: 6.4 Sequence: AATGATAATGAATATCATT
Locus tag: RBAM_010510
Name: yhfQ Funciton: Putative iron(III) dicitrate-binding lipoprotein |
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yhfQ
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Putative iron(III) dicitrate-binding lipoprotein
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Position: -187
Score: 6.7 Sequence: AATGATAATGATTATCAAT
Position: -51
Score: 5.5 Sequence: ACTGATAATGATTCTCTTT
Locus tag: RBAM_030440
Name: fhuD Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3) |
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fhuD
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Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
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Position: -185
Score: 5.5 Sequence: AAAGAGAATCATTATCAGT
Position: -49
Score: 6.7 Sequence: ATTGATAATCATTATCATT
Locus tag: RBAM_030430
Name: fhuB Funciton: Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
Locus tag: RBAM_030420
Name: fhuG Funciton: Ferrichrome transport system permease protein FhuG
Locus tag: RBAM_030410
Name: fhuC Funciton: Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3) |
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fhuB
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Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
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fhuG
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Ferrichrome transport system permease protein FhuG
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fhuC
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Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
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Position: -38
Score: 6.1 Sequence: ATTGATAATAGTTATCAAT
Locus tag: RBAM_002120
Name: feuA Funciton: Fe3+-bacillibactin ABC transporter substrate-binding protein
Locus tag: RBAM_002110
Name: feuB Funciton: Fe3+-bacillibactin ABC transporter permease
Locus tag: RBAM_002100
Name: feuC Funciton: Fe3+-bacillibactin ABC transporter permease
Locus tag: RBAM_002090
Name: ybbA Funciton: Putative iron-chelator esterase |
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feuA
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Fe3+-bacillibactin ABC transporter substrate-binding protein
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feuB
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Fe3+-bacillibactin ABC transporter permease
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feuC
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Fe3+-bacillibactin ABC transporter permease
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ybbA
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Putative iron-chelator esterase
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Position: -61
Score: 6.5 Sequence: ATTGAAAATCATTATCAAT
Locus tag: RBAM_029060
Name: besA Funciton: Trilactone hydrolase [bacillibactin] siderophore |
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besA
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Trilactone hydrolase [bacillibactin] siderophore
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Position: -141
Score: 5.2 Sequence: TGTGATAAGCATTCTCAAT
Locus tag: RBAM_021190
Name: fer Funciton: Ferredoxin |
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fer
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Ferredoxin
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Position: -349
Score: 6.2 Sequence: ATTGAAAATCATTCTCAAT
Position: -314
Score: 5.8 Sequence: TATGAAAATGATTCTCATT
Locus tag: RBAM_020180
Name: ypbR Funciton: Putative GTP-binding protein |
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ypbR
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Putative GTP-binding protein
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Position: -208
Score: 6.1 Sequence: ACTGATAATGATTCTCAAT
Locus tag: RBAM_004860
Name: ydbN Funciton: Hypothetical protein |
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ydbN
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Hypothetical protein
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Position: -53
Score: 6.7 Sequence: AATGATAATCATTATCAAT
Locus tag: RBAM_029050
Name: dhbA Funciton: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28)
Locus tag: RBAM_029040
Name: dhbC Funciton: Isochorismate synthase (EC 5.4.4.2)
Locus tag: RBAM_029030
Name: dhbE Funciton: 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58)
Locus tag: RBAM_029020
Name: dhbB Funciton: Isochorismatase (EC 3.3.2.1)
Locus tag: RBAM_029010
Name: dhbF Funciton: Siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase |
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dhbA
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2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28)
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dhbC
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Isochorismate synthase (EC 5.4.4.2)
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dhbE
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2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58)
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dhbB
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Isochorismatase (EC 3.3.2.1)
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dhbF
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Siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase
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Position: -47
Score: 5.7 Sequence: ATTGAGAAATATTATCATT
Locus tag: RBAM_034370
Name: ywjA Funciton: Multidrug resistance ABC transporter ATP-binding and permease protein |
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ywjA
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Multidrug resistance ABC transporter ATP-binding and permease protein
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Position: -124
Score: 5.5 Sequence: ATTGATAATGATATTCAGA
Locus tag: RBAM_030060
Name: yusV Funciton: Iron(III)-siderophore transporter (ATP binding component) |
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yusV
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Iron(III)-siderophore transporter (ATP binding component)
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Position: -35
Score: 5.2 Sequence: ATTAATAACAATTTTCAAT
Locus tag: RBAM_029160
Name: yumC Funciton: Ferredoxin--NADP reductase 2 |
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yumC
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Ferredoxin--NADP reductase 2
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Position: -36
Score: 6.5 Sequence: AATGATAATCATTATCACT
Locus tag: RBAM_036560
Name: yxeB Funciton: Fe3+-hydroxamate ABC transporter substrate-binding protein |
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yxeB
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Fe3+-hydroxamate ABC transporter substrate-binding protein
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Position: -47
Score: 5.8 Sequence: TTTGAGAATCATTTTCATT
Locus tag: RBAM_007300
Name: yetG Funciton: Putative monooxygenase |
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yetG
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Putative monooxygenase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |