Regulon of PerR in Staphylococcus capitis SK14
| Regulator type: | Transcription factor |
| TF locus tag: | STACA0001_1914 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Oxidative stress response |
| Effector: | Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) |
| Regulog: | PerR - Staphylococcaceae |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - FUR
- By effector - Hydrogen peroxide
- By effector - Manganese ion, (Mn2+)
- By effector - Iron ion, (Fe2+)
- By pathway - Oxidative stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -42
Score: 5.5 Sequence: TTATAATTATTACAA
Locus tag: STACA0001_1577
Name: katA Funciton: catalase |
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katA
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catalase
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Position: -32
Score: 5.1 Sequence: TAAGAATGATTTTAA
Locus tag: STACA0001_0695
Name: hemE Funciton: uroporphyrinogen-III decarboxylase
Locus tag: STACA0001_0694
Name: hemH Funciton: ferrochelatase
Locus tag: STACA0001_0693
Name: hemG Funciton: protoporphyrinogen oxidase |
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hemE
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uroporphyrinogen-III decarboxylase
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hemH
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ferrochelatase
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hemG
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protoporphyrinogen oxidase
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Position: -40
Score: 5.5 Sequence: TTAAAATGATTATAA
Locus tag: STACA0001_1739
Name: fur Funciton: iron uptake regulatory protein Fur |
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fur
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iron uptake regulatory protein Fur
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Position: -55
Score: 5.7 Sequence: TTAAAATTATTATAA
Locus tag: STACA0001_0212
Name: sufC Funciton: FeS assembly ATPase SufC
Locus tag: STACA0001_0211
Name: sufD Funciton: FeS assembly protein SufD
Locus tag: STACA0001_0210
Name: sufS Funciton: cysteine desulfurase (Selenocysteine lyase) (Selenocysteine reductase) (Selenocysteine beta-lyase) (SCL)
Locus tag: STACA0001_0209
Name: nifU Funciton: SUF system FeS assembly protein, NifU family
Locus tag: STACA0001_0208
Name: sufB Funciton: FeS assembly protein SufB |
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sufC
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FeS assembly ATPase SufC
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sufD
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FeS assembly protein SufD
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sufS
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cysteine desulfurase (Selenocysteine lyase) (Selenocysteine reductase) (Selenocysteine beta-lyase) (SCL)
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nifU
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SUF system FeS assembly protein, NifU family
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sufB
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FeS assembly protein SufB
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Position: -36
Score: 5.6 Sequence: TAATAATTATTATTA
Locus tag: STACA0001_1914
Name: perR Funciton: peroxide-responsive repressor PerR |
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perR
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peroxide-responsive repressor PerR
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Position: -132
Score: 5.5 Sequence: TTAGAATAATTTTAA
Position: -89
Score: 5.6 Sequence: TTAGAATAATTATTA
Locus tag: STACA0001_1946
Name: ftnA Funciton: ferritin |
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ftnA
|
ferritin
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Position: -109
Score: 5.2 Sequence: TTGAAATAATTATAA
Position: -68
Score: 5.8 Sequence: TTAGAATTATTATAA
Position: -54
Score: 4.8 Sequence: ATATAATAATTATTG
Locus tag: STACA0001_0845
Name: dps Funciton: metalloregulation DNA-binding stress protein |
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dps
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metalloregulation DNA-binding stress protein
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Position: -76
Score: 5.8 Sequence: TTAGAATTATTATAA
Locus tag: STACA0001_1447
Name: ahpC Funciton: alkyl hydroperoxide reductase subunit C
Locus tag: STACA0001_1446
Name: ahpF Funciton: alkyl hydroperoxide reductase subunit F |
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ahpC
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alkyl hydroperoxide reductase subunit C
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ahpF
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alkyl hydroperoxide reductase subunit F
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |