Regulon of LexA in Staphylococcus epidermidis ATCC 12228
| Regulator type: | Transcription factor |
| TF locus tag: | SE1022 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Staphylococcaceae |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -52
Score: 5.6 Sequence: AACAGAACAAATGTTCGTAT
Locus tag: SE1605
Name: null Funciton: SPBc2 prophage-derived uncharacterized protein |
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SPBc2 prophage-derived uncharacterized protein
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Position: -77
Score: 5.7 Sequence: ATAAGAACAAATGTTCTTAT
Position: -48
Score: 4.7 Sequence: AATAGAACACGTGTTCTTAT
Locus tag: SE1046
Name: uvrX Funciton: Putative UV-damage repair protein |
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uvrX
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Putative UV-damage repair protein
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Position: -33
Score: 5.2 Sequence: TAACGAACGTACGTTTGTAG
Locus tag: SE1036
Name: parE Funciton: DNA topoisomerase IV subunit B
Locus tag: SE1037
Name: parC Funciton: DNA topoisomerase IV subunit A |
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parE
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DNA topoisomerase IV subunit B
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parC
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DNA topoisomerase IV subunit A
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Position: -517
Score: 4.9 Sequence: cctaGAACATtTGTTtGTAT
Position: -459
Score: 5.5 Sequence: tTACGAACAaATGTTtGTta
Locus tag: SE1022
Name: lexA Funciton: SOS regulatory LexA protein |
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lexA
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SOS regulatory LexA protein
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Position: -145
Score: 5.1 Sequence: ATAAGTACGTTTGTTCGTTT
Position: -102
Score: 5.4 Sequence: ATACGAACAAATATTCGCAA
Locus tag: SE0963
Name: recA Funciton: recombinase A |
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recA
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recombinase A
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Position: -130
Score: 5.7 Sequence: AAGCGAACAAATGTTTGTAT
Locus tag: SE0541
Name: uvrB Funciton: excinuclease ABC subunit B
Locus tag: SE0542
Name: uvrA Funciton: exinuclease ABC subunit A |
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uvrB
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excinuclease ABC subunit B
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uvrA
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exinuclease ABC subunit A
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Position: -33
Score: 5.7 Sequence: AAACGAACAAACGTTCTTAT
Locus tag: SE1028
Name: sbcD Funciton: exonuclease SbcD
Locus tag: SE1029
Name: sbcC Funciton: exonuclease SbcC |
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sbcD
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exonuclease SbcD
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sbcC
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exonuclease SbcC
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Position: -66
Score: 5.1 Sequence: GTACGAAAGTATGTTCGCAT
Locus tag: SE1762
Name: SA1975 Funciton: predicted membrane-bound hydrolase
Locus tag: SE1761
Name: SA1974 Funciton: UDP-N-acetylglucosamine pyrophosphorylase
Locus tag: SE1760
Name: SA1973 Funciton: hemolysin III |
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SA1975
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predicted membrane-bound hydrolase
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SA1974
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UDP-N-acetylglucosamine pyrophosphorylase
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SA1973
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hemolysin III
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Position: -127
Score: 5.1 Sequence: AACAGAACGTATGTTCTGTT
Locus tag: SE1627
Name: SA1749 Funciton: hypothetical protein |
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SA1749
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hypothetical protein
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Position: -116
Score: 5.9 Sequence: AAGCGAACATTTGTTCGTTT
Locus tag: SE0511
Name: SA0684 Funciton: putative permease
Locus tag: SE0510
Name: SA0683 Funciton: 7-cyano-7-deazaguanine reductase |
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SA0684
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putative permease
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SA0683
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7-cyano-7-deazaguanine reductase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |