Regulon of CymR in Clostridium acetobutylicum ATCC 824
| Regulator type: | Transcription factor |
| TF locus tag: | CAC2236 |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Cysteine metabolism |
| Effector: | |
| Regulog: | CymR - Clostridia-1 |
| Statistics of regulated genes: | |
| - Genes | 20 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-1
- By TF family - Rrf2
- By pathway - Cysteine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -277
Score: 5.7 Sequence: ATATTCATATTAATATAGTAGGAATTA
Position: -77
Score: 5 Sequence: CATTACATAGTAAAGTAATATGTTTTA
Locus tag: CAC0102
Name: metY Funciton: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Locus tag: CAC0103
Name: cysC Funciton: Adenylylsulfate kinase (EC 2.7.1.25)
Locus tag: CAC0104
Name: aprA Funciton: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Locus tag: CAC0105
Name: aprB Funciton: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Locus tag: CAC0106
Name: null Funciton: ABC-type probable sulfate transporter, periplasmic binding protein
Locus tag: CAC0107
Name: null Funciton: ABC-type probable sulfate transporter, ATPase component
Locus tag: CAC0108
Name: null Funciton: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Locus tag: CAC0109
Name: cysD Funciton: Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Locus tag: CAC0110
Name: cysN Funciton: Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) |
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metY
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O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
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cysC
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Adenylylsulfate kinase (EC 2.7.1.25)
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aprA
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Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
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aprB
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Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
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ABC-type probable sulfate transporter, periplasmic binding protein
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ABC-type probable sulfate transporter, ATPase component
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ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
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cysD
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Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
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cysN
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Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
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Position: -70
Score: 5.8 Sequence: TTAAACATATTAGTTTAGTAGGTATTT
Locus tag: CAC0878
Name: CAC0878 Funciton: Cysteine ABC transporter permease component
Locus tag: CAC0879
Name: CAC0879 Funciton: Cysteine ABC transporter, ATPase component
Locus tag: CAC0880
Name: CAC0880 Funciton: Cysteine ABC transporter, substrate-binding protein |
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CAC0878
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Cysteine ABC transporter permease component
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CAC0879
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Cysteine ABC transporter, ATPase component
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CAC0880
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Cysteine ABC transporter, substrate-binding protein
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Position: -86
Score: 5.3 Sequence: AAAATTCTACTTGACAAGTAAAATTTT
Locus tag: CAC2236
Name: cymR Funciton: Predicted transcriptional regulator of cysteine synthase, Rrf2 family |
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cymR
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Predicted transcriptional regulator of cysteine synthase, Rrf2 family
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Position: -354
Score: 5.6 Sequence: GTATACCTACTTGTATACTAGGAATAT
Locus tag: CAC3325
Name: CAC3325 Funciton: L-Cystine ABC transporter, periplasmic cystine-binding protein TcyA
Locus tag: CAC3326
Name: CAC3326 Funciton: L-Cystine ABC transporter, permease protein TcyB
Locus tag: CAC3327
Name: CAC3327 Funciton: L-Cystine ABC transporter, ATP-binding protein TcyC |
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CAC3325
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L-Cystine ABC transporter, periplasmic cystine-binding protein TcyA
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CAC3326
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L-Cystine ABC transporter, permease protein TcyB
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CAC3327
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L-Cystine ABC transporter, ATP-binding protein TcyC
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Position: -49
Score: 5.8 Sequence: ATATTCCTAGTAAACAAATGTGTTTAA
Locus tag: CAC2235
Name: cysK Funciton: Cysteine synthase (EC 2.5.1.47) |
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cysK
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Cysteine synthase (EC 2.5.1.47)
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Position: -473
Score: 5.4 Sequence: AAAAACCTACTTATCAGATATGAAAAA
Locus tag: CAC0929
Name: ubiG Funciton: SAM-dependent methlytransferase UbiG
Locus tag: CAC0930
Name: mccB Funciton: Cystathionine gamma-lyase (EC 4.4.1.1)
Locus tag: CAC0931
Name: null Funciton: Cystathionine beta-synthase (EC 4.2.1.22) |
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ubiG
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SAM-dependent methlytransferase UbiG
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mccB
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Cystathionine gamma-lyase (EC 4.4.1.1)
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Cystathionine beta-synthase (EC 4.2.1.22)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |