Regulon of IscR in Clostridium hiranonis DSM 13275
| Regulator type: | Transcription factor |
| TF locus tag: | CLOHIR_01195 |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Regulog: | IscR - Clostridia-2 |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-2
- By TF family - Rrf2
- By effector - Iron-sulfur cluster redox state
- By pathway - Iron-sulfur cluster biogenesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -103
Score: 5.9 Sequence: ACAAATCATACTAAAATAGTAGGAAATAA
Position: -77
Score: 5.7 Sequence: TAATACTTGACAAAAATAGTCGGATATAA
Position: -43
Score: 6 Sequence: TTAAACCATAGTAAAACAGTAGGAATTAA
Locus tag: CLOHIR_01195
Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: CLOHIR_01196
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: CLOHIR_01197
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: CLOHIR_01198
Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) |
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iscR
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Iron-sulfur cluster assembly transcription factor IscR
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iscS
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Cysteine desulfurase (EC 2.8.1.7)
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iscU
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Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
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trmU
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tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |