Regulon of IscR in Clostridium bartlettii DSM 16795

Properties
Regulator type:	Transcription factor
TF locus tag:	CLOBAR_02189
Regulator family:	Rrf2
Regulation mode:	repressor
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Regulog:	IscR - Clostridia-2
Statistics of regulated genes:
- Genes	4
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 7 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-2
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Regulated operons
	Locus Tag	Name	Function
Position: -113 Score: 6.6 Sequence: TTAATTCTGACTAAAATAGTCAAAATTAA Position: -88 Score: 5.7 Sequence: TTAATGTTGACAAAAACACTCAAGTATAA Locus tag: CLOBAR_02189 Name: iscR Funciton: Iron-sulfur cluster assembly transcription factor IscR Locus tag: CLOBAR_02188 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7) Locus tag: CLOBAR_02187 Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like Locus tag: CLOBAR_02186 Name: trmU Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
	CLOBAR_02189	iscR	Iron-sulfur cluster assembly transcription factor IscR
	CLOBAR_02188	iscS	Cysteine desulfurase (EC 2.8.1.7)
	CLOBAR_02187	iscU	Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
	CLOBAR_02186	trmU	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD