Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of IscR in Clostridium beijerincki NCIMB 8052

Properties
Regulator type: Transcription factor
TF locus tag: Cbei_1097
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Regulog: IscR - Clostridia-1
Statistics of regulated genes:
- Genes 5
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -105
Score: 5.7
Sequence: CAAAAGCCGAGTATTTTGGTAAGATATAA
Locus tag: Cbei_1097
Name: iscR
Funciton: Iron-sulfur cluster assembly transcription factor IscR
Locus tag: Cbei_1098
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7)
Locus tag: Cbei_1099
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
Locus tag: Cbei_1100
Name: trmU
Funciton: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)
iscR
Iron-sulfur cluster assembly transcription factor IscR
iscS
Cysteine desulfurase (EC 2.8.1.7)
iscU
Iron-sulfur cluster assembly scaffold protein IscU/NifU-like
trmU
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61)

Position: -55
Score: 5.2
Sequence: TTATAACATAGTAAACTGATAAGAATTAT
Locus tag: Cbei_4356
Name: cysK
Funciton: Cysteine synthase (EC 2.5.1.47)
cysK
Cysteine synthase (EC 2.5.1.47)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD