Regulon of XylR in Clostridium difficile 630

Properties
Regulator type:	Transcription factor
TF locus tag:	CD3066
Regulator family:	ROK
Regulation mode:	repressor
Biological process:	Xylose utilization
Effector:	Xylose
Regulog:	XylR - Clostridia-2
Statistics of regulated genes:
- Genes	8
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-2
By TF family - ROK
By effector - Xylose
By pathway - Xylose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -123 Score: 5.4 Sequence: GTTAGTATATTAAACTAACTTAT Locus tag: CD3066 Name: xylR Funciton: Xylose repressor XylR, ROK family
	CD3066	xylR	Xylose repressor XylR, ROK family
Position: -113 Score: 5.4 Sequence: ATAAGTTAGTTTAATATACTAAC Locus tag: CD3065 Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17) Locus tag: CD3064 Name: xylA Funciton: Xylose isomerase (EC 5.3.1.5)
	CD3065	xylB	Xylulose kinase (EC 2.7.1.17)
	CD3064	xylA	Xylose isomerase (EC 5.3.1.5)
Position: -127 Score: 5.5 Sequence: GTAAGTTAGTTTAATGTACAAAT Locus tag: CD3071 Name: xylS Funciton: Alpha-xylosidase Locus tag: CD3070 Name: CD3070 Funciton: Phosphotransferase system for xylose-containing disaccharide, EIIC component Locus tag: CD3069 Name: CD3069 Funciton: Phosphotransferase system for xylose-containing disaccharide, EIID component Locus tag: CD3068 Name: CD3068 Funciton: Phosphotransferase system for xylose-containing disaccharide, EIIB component Locus tag: CD3067 Name: CD3067 Funciton: Phosphotransferase system for xylose-containing disaccharide, EIIA component
	CD3071	xylS	Alpha-xylosidase
	CD3070	CD3070	Phosphotransferase system for xylose-containing disaccharide, EIIC component
	CD3069	CD3069	Phosphotransferase system for xylose-containing disaccharide, EIID component
	CD3068	CD3068	Phosphotransferase system for xylose-containing disaccharide, EIIB component
	CD3067	CD3067	Phosphotransferase system for xylose-containing disaccharide, EIIA component

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD