Regulon of XylR in Clostridium difficile 630
| Regulator type: | Transcription factor |
| TF locus tag: | CD3066 |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Xylose utilization |
| Effector: | Xylose |
| Regulog: | XylR - Clostridia-2 |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-2
- By TF family - ROK
- By effector - Xylose
- By pathway - Xylose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -123
Score: 5.4 Sequence: GTTAGTATATTAAACTAACTTAT
Locus tag: CD3066
Name: xylR Funciton: Xylose repressor XylR, ROK family |
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xylR
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Xylose repressor XylR, ROK family
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Position: -113
Score: 5.4 Sequence: ATAAGTTAGTTTAATATACTAAC
Locus tag: CD3065
Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: CD3064
Name: xylA Funciton: Xylose isomerase (EC 5.3.1.5) |
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xylB
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Xylulose kinase (EC 2.7.1.17)
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xylA
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Xylose isomerase (EC 5.3.1.5)
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Position: -127
Score: 5.5 Sequence: GTAAGTTAGTTTAATGTACAAAT
Locus tag: CD3071
Name: xylS Funciton: Alpha-xylosidase
Locus tag: CD3070
Name: CD3070 Funciton: Phosphotransferase system for xylose-containing disaccharide, EIIC component
Locus tag: CD3069
Name: CD3069 Funciton: Phosphotransferase system for xylose-containing disaccharide, EIID component
Locus tag: CD3068
Name: CD3068 Funciton: Phosphotransferase system for xylose-containing disaccharide, EIIB component
Locus tag: CD3067
Name: CD3067 Funciton: Phosphotransferase system for xylose-containing disaccharide, EIIA component |
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xylS
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Alpha-xylosidase
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CD3070
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Phosphotransferase system for xylose-containing disaccharide, EIIC component
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CD3069
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Phosphotransferase system for xylose-containing disaccharide, EIID component
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CD3068
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Phosphotransferase system for xylose-containing disaccharide, EIIB component
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CD3067
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Phosphotransferase system for xylose-containing disaccharide, EIIA component
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |