Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PdxW2 in Pseudomonas mendocina ymp

Properties
Regulator type: Transcription factor
TF locus tag: Pmen_0130
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine biosynthesis
Effector: Pyridoxal-5-phosphate
Regulog: PdxW2 - Pseudomonadaceae
Statistics of regulated genes:
- Genes 3
- Operons 1
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -88
Score: 13.2
Sequence: ATTGGCTCT-(15)-AATGGATCT-(5)-CAGGCCAAT
Locus tag: Pmen_0131
Name: pdxO2
Funciton: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Locus tag: Pmen_0132
Name: COG456 (RimI), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
Locus tag: Pmen_0133
Name: COG1670 (RimL), PF00583
Funciton: GCN5-related N-acetyltransferase (GNAT) domain
pdxO2
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
COG456 (RimI), PF00583
GCN5-related N-acetyltransferase (GNAT) domain
COG1670 (RimL), PF00583
GCN5-related N-acetyltransferase (GNAT) domain
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD