Regulon of PdxW2 in Pseudomonas mendocina ymp
| Regulator type: | Transcription factor |
| TF locus tag: | Pmen_0130 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine biosynthesis |
| Effector: | Pyridoxal-5-phosphate |
| Regulog: | PdxW2 - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -88
Score: 13.2 Sequence: ATTGGCTCT-(15)-AATGGATCT-(5)-CAGGCCAAT
Locus tag: Pmen_0131
Name: pdxO2 Funciton: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Locus tag: Pmen_0132
Name: COG456 (RimI), PF00583 Funciton: GCN5-related N-acetyltransferase (GNAT) domain
Locus tag: Pmen_0133
Name: COG1670 (RimL), PF00583 Funciton: GCN5-related N-acetyltransferase (GNAT) domain |
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pdxO2
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Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
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COG456 (RimI), PF00583
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GCN5-related N-acetyltransferase (GNAT) domain
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COG1670 (RimL), PF00583
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GCN5-related N-acetyltransferase (GNAT) domain
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |