Regulon of MalR1/MalR2/MalR3 in Bifidobacterium dentium Bd1
| Regulator type: | Transcription factor |
| TF locus tag: | BDP_2206, BDP_2192 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Maltose utilization; Maltodextrin utilization |
| Effector: | Maltose |
| Regulog: | MalR1/MalR2/MalR3 - Bifidobacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 12 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - LacI
- By effector - Maltose
- By pathway - Maltose utilization
- By pathway - Maltodextrin utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -107
Score: 4.9 Sequence: TTGACAACGTTCGCAG
Locus tag: BDP_2192
Name: malR3 Funciton: Transcriptional regulator of maltose/maltodextrin utilization, LacI family |
|||
|
malR3
|
Transcriptional regulator of maltose/maltodextrin utilization, LacI family
|
||
|
Position: -175
Score: 5.4 Sequence: TTGCAAACGTTGGCAG
Position: -83
Score: 4.2 Sequence: ATGTGAACGTATGCAG
Locus tag: BDP_2199
Name: malE1 Funciton: Maltose/maltodextrin ABC transporter, substrate binding protein
Locus tag: BDP_2197
Name: malF1 Funciton: Maltose/maltodextrin ABC transporter, permease protein 1
Locus tag: BDP_2196
Name: malG1 Funciton: Maltose/maltodextrin ABC transporter, permease protein 2
Locus tag: BDP_2195
Name: pulA Funciton: Pullulanase (EC 3.2.1.41) |
|||
|
malE1
|
Maltose/maltodextrin ABC transporter, substrate binding protein
|
||
|
malF1
|
Maltose/maltodextrin ABC transporter, permease protein 1
|
||
|
malG1
|
Maltose/maltodextrin ABC transporter, permease protein 2
|
||
|
pulA
|
Pullulanase (EC 3.2.1.41)
|
||
|
Position: -224
Score: 5.1 Sequence: TTGCATACGATTGCAT
Locus tag: BDP_0335
Name: pgi Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
|||
|
pgi
|
Glucose-6-phosphate isomerase (EC 5.3.1.9)
|
||
|
Position: -278
Score: 5.4 Sequence: TTACAAACGTTTGCAA
Locus tag: BDP_2205
Name: malF Funciton: Maltose/maltodextrin ABC transporter, permease protein 1
Locus tag: BDP_2204
Name: malG Funciton: Maltose/maltodextrin ABC transporter, permease protein 2 |
|||
|
malF
|
Maltose/maltodextrin ABC transporter, permease protein 1
|
||
|
malG
|
Maltose/maltodextrin ABC transporter, permease protein 2
|
||
|
Position: -211
Score: 4.6 Sequence: TCGCAAACGATTTCAT
Position: -111
Score: 5.3 Sequence: TTGCTTACGTTTGCAA
Locus tag: BDP_2207
Name: malE Funciton: Maltose/maltodextrin ABC transporter, substrate binding protein |
|||
|
malE
|
Maltose/maltodextrin ABC transporter, substrate binding protein
|
||
|
Position: -114
Score: 4.6 Sequence: ATGCAATCGTATTCAC
Locus tag: BDP_1336
Name: ppgK Funciton: Polyphosphate glucokinase (EC 2.7.1.63) |
|||
|
ppgK
|
Polyphosphate glucokinase (EC 2.7.1.63)
|
||
|
Position: -68
Score: 5 Sequence: TTGAATACGTTGTCAT
Locus tag: BDP_0418
Name: malQ1 Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
|||
|
malQ1
|
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
|
||
|
Position: -177
Score: 4.6 Sequence: TTGCAAACGAATGCCA
Position: -109
Score: 4.9 Sequence: TTGAGAACGTATGCAT
Locus tag: BDP_0029
Name: glgP Funciton: Glycogen phosphorylase (EC 2.4.1.1) |
|||
|
glgP
|
Glycogen phosphorylase (EC 2.4.1.1)
|
||
|
Position: -72
Score: 5.4 Sequence: TTGCAAACGTTTGTAA
Locus tag: BDP_2206
Name: malR1 Funciton: Transcriptional regulator of maltose/maltodextrin utilization, LacI family |
|||
|
malR1
|
Transcriptional regulator of maltose/maltodextrin utilization, LacI family
|
||
|
Position: -136
Score: 4.8 Sequence: TTGAAAACGATAGCAT
Locus tag: BDP_2201
Name: malQ Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
|||
|
malQ
|
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
|
||
|
Position: -170
Score: 4.9 Sequence: GTGCAAACGTATGCAC
Locus tag: BDP_1029
Name: aapA Funciton: Alpha-amylase EC 3.2.1.1 / Pullulanase (EC 3.2.1.41) |
|||
|
aapA
|
Alpha-amylase EC 3.2.1.1 / Pullulanase (EC 3.2.1.41)
|
||
|
Position: -79
Score: 5.4 Sequence: CTGCCAACGTTTGCAA
Locus tag: BDP_2200
Name: agl3 Funciton: Alpha-glucosidase |
|||
|
agl3
|
Alpha-glucosidase
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |