Profile of regulator MalR1/MalR2/MalR3 in Bifidobacteriaceae
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Maltose utilization; Maltodextrin utilization |
| Effector: | Maltose |
| Regulog: | MalR1/MalR2/MalR3 - Bifidobacteriaceae |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - LacI
- By effector - Maltose
- By pathway - Maltose utilization
- By pathway - Maltodextrin utilization
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Bifidobacterium longum subsp. infantis ATCC 15697 | |||||
| Blon_2444 | malE | -109 | 5.1 | TTGCTATCGTTTGCAA | |
| Blon_2444 | malE | -207 | 4.6 | TTGCGAACGCTTGCAT | |
| Blon_2442 | malF | -282 | 5.1 | TTACAAACGTTTGCAC | |
| Blon_2443 | malR1 | -116 | 5.1 | GTGCAAACGTTTGTAA | |
| Blon_0139 | malQ | -145 | 5.2 | TTGCAATCGTTGTCAA | |
| Blon_0417 | pgi | -143 | 5.1 | ATGCAAACGATGGCAA | |
| Blon_0070 | glgP | -106 | 5 | ATGCAAACGATGGCAT | |
| Blon_0070 | glgP | -48 | 4.9 | ATGAGAACGTATGCAA | |
| Bifidobacterium adolescentis ATCC 15703 | |||||
| BAD_1566 | malE | -156 | 4.4 | TCGCAAACGCTTGCAT | |
| BAD_1566 | malE | -56 | 5.4 | TTGCCTACGTTTGCAA | |
| BAD_1564 | malF | -210 | 5.1 | TTACAAACGTTTTCAT | |
| BAD_1565 | malR1 | -107 | 5.1 | ATGAAAACGTTTGTAA | |
| BAD_1561 | aglA | -190 | 4.8 | TTGGCAACGTATGCAA | |
| BAD_1560 | malQ | -124 | 4.7 | TTGAAAACGATATCAT | |
| BAD_0231 | pgi | -164 | 4.9 | TTGCATACGATTTCAG | |
| BAD_0030 | glgP | -176 | 4.3 | TTGCAAACGAATGCCG | |
| BAD_0030 | glgP | -108 | 4.8 | ATGAGAACGTATGCAT | |
| BAD_0957 | ppgK | -116 | 4.3 | GTGCAATCGTTCTCAC | |
| BAD_1556 | malR3 | -117 | 5.1 | TTGACAACGTTCGCAA | |
| BAD_0708 | aapA | -317 | 4.8 | TTGCAATCGTTTGCTG | |
| BAD_1559 | pulA | -166 | 4.2 | TTGCAAAGCTTTGCAG | |
| BAD_0308 | malQ1 | -60 | 5.1 | TTGCATACGTTGTCAT | |
| BAD_0365 | pgm | -287 | 4.9 | CTGCGAACGTTTTCAG | |
| Bifidobacterium angulatum DSM 20098 | |||||
| BIFANG_00267 | malE | -37 | 5.3 | TTGCCATCGTTTGCAA | |
| BIFANG_00196 | pgi | -196 | 4.8 | ATGAGTACGTTTGCAT | |
| BIFANG_00270 | malF | -65 | 5.4 | TTACAAACGTTTGCAA | |
| BIFANG_00269 | malR1 | -101 | 5.4 | TTGCAAACGTTTGTAA | |
| BIFANG_00274 | malQ | -123 | 5.2 | TTGCAATCGTTGTCAA | |
| BIFANG_00488 | glgP | -208 | 4.4 | GTGCCCACGTTGTCAT | |
| BIFANG_00488 | glgP | -142 | 5 | ATGACAACGTATGCAT | |
| BIFANG_01000 | ppgK | -123 | 4.9 | TCGCATACGTTTGCAT | |
| BIFANG_01302 | aapA | -166 | 4.9 | TTGATAACGTATGCAT | |
| BIFANG_00762 | pgm | -49 | 5.3 | ATGCCAACGTTTTCAA | |
| BIFANG_00703 | malQ1 | -125 | 5 | TTGCAAACGTTAGCTA | |
| Bifidobacterium animalis subsp. lactis AD011 | |||||
| BLA_0913 | malE | -116 | 5 | CTGCCCACGTTTGCAA | |
| BLA_0707 | malE | -116 | 5 | CTGCCCACGTTTGCAA | |
| BLA_0911 | malF | -189 | 4.8 | GCGCAAACGTTTTCAA | |
| BLA_0912 | malR1 | -220 | 4.8 | TTGAAAACGTTTGCGC | |
| BLA_0706 | aglA | -240 | 5 | TTGCAAACGTGGGCAG | |
| BLA_0908 | malQ | -92 | 5.2 | TTGCAAACGATTTCAT | |
| BLA_0914 | aglA | -240 | 5 | TTGCAAACGTGGGCAG | |
| BLA_0279 | pgi | -229 | 5 | TTGAAAACGATTTCAT | |
| BLA_0066 | glgP | -178 | 5.1 | ATACCAACGTTTGCAA | |
| BLA_0066 | glgP | -80 | 4.9 | ATGAGAACGTATGCAA | |
| BLA_0907 | agl3 | -107 | 5.5 | TTGCAAACGTTGTCAA | |
| BLA_0353 | malQ1 | -70 | 4.7 | ATGAAAACGTTTGCTC | |
| BLA_0906 | malE1 | -178 | 5.5 | TTGACAACGTTTGCAA | |
| BLA_0403 | pgm | -124 | 5 | GTGCAAACGATTGCAT | |
| Bifidobacterium bifidum NCIMB 41171 | |||||
| BbifN4_010100000050 | glgP | -108 | 5.1 | CTGCAAACGATTGCAT | |
| BbifN4_010100006573 | malR3 | -90 | 5.1 | TTGAGAACGTTTGCAG | |
| Bifidobacterium breve DSM 20213 | |||||
| BIFBRE_00012 | malE | -209 | 4.8 | TTGCCAACGCTTGCAT | |
| BIFBRE_00012 | malE | -109 | 5.1 | ATGCCATCGTTTGCAA | |
| BIFBRE_00014 | malF | -239 | 5.2 | TTACAAACGTTTGCAG | |
| BIFBRE_00013 | malR1 | -108 | 5.2 | CTGCAAACGTTTGTAA | |
| BIFBRE_01907 | malQ | -121 | 5.2 | TTGCAATCGTTGTCAA | |
| BIFBRE_01901 | malR2 | -240 | 5 | ATGCAAACGATGTCAA | |
| BIFBRE_02204 | pgi | -141 | 4.3 | GTGCAATCGATGTCAT | |
| BIFBRE_00575 | ppgK | -26 | 4.9 | ATGCACACGTTTGCAC | |
| BIFBRE_01915 | malR3 | -240 | 5.5 | TTGACAACGTTTGCAA | |
| BIFBRE_01915 | malR3 | -175 | 5 | CTGCATACGTTCGCAA | |
| BIFBRE_01909 | agl3 | -85 | 5.2 | TTGCATACGTATGCAG | |
| BIFBRE_01916 | aapA | -157 | 5 | TTGCGAACGTATGCAG | |
| BIFBRE_01916 | aapA | -92 | 5.5 | TTGCAAACGTTGTCAA | |
| BIFBRE_01909 | agl3 | -212 | 4.9 | ATGCACACGTTTTCAG | |
| BIFBRE_00256 | malQ1 | -67 | 5.1 | TTGCAAACGTAAGCAT | |
| BIFBRE_01910 | malE1 | -187 | 5.2 | CTGCATACGTATGCAA | |
| BIFBRE_01910 | malE1 | -60 | 4.9 | CTGAAAACGTGTGCAT | |
| Bifidobacterium dentium Bd1 | |||||
| BDP_2207 | malE | -211 | 4.6 | TCGCAAACGATTTCAT | |
| BDP_2207 | malE | -111 | 5.3 | TTGCTTACGTTTGCAA | |
| BDP_2205 | malF | -278 | 5.4 | TTACAAACGTTTGCAA | |
| BDP_2206 | malR1 | -72 | 5.4 | TTGCAAACGTTTGTAA | |
| BDP_2201 | malQ | -136 | 4.8 | TTGAAAACGATAGCAT | |
| BDP_0335 | pgi | -224 | 5.1 | TTGCATACGATTGCAT | |
| BDP_0029 | glgP | -177 | 4.6 | TTGCAAACGAATGCCA | |
| BDP_0029 | glgP | -109 | 4.9 | TTGAGAACGTATGCAT | |
| BDP_1336 | ppgK | -114 | 4.6 | ATGCAATCGTATTCAC | |
| BDP_2192 | malR3 | -107 | 4.9 | TTGACAACGTTCGCAG | |
| BDP_1029 | aapA | -170 | 4.9 | GTGCAAACGTATGCAC | |
| BDP_2199 | malE1 | -83 | 4.2 | ATGTGAACGTATGCAG | |
| BDP_2199 | malE1 | -175 | 5.4 | TTGCAAACGTTGGCAG | |
| BDP_2200 | agl3 | -79 | 5.4 | CTGCCAACGTTTGCAA | |
| BDP_0418 | malQ1 | -68 | 5 | TTGAATACGTTGTCAT | |
| Bifidobacterium gallicum DSM 20093 | |||||
| BIFGAL_00112 | malE | -119 | 4.9 | ATGATTACGTTTGCAA | |
| BIFGAL_00117 | null | -424 | 4.7 | TTGCAAACGTTTGTTG | |
| BIFGAL_00114 | malR1 | -181 | 4.7 | CAACAAACGTTTGCAA | |
| BIFGAL_00121 | malQ | -149 | 5.1 | TTGCAAACGATGGCAG | |
| BIFGAL_00008 | pgi | -207 | 4.8 | ATGCAAACGTATGCTG | |
| BIFGAL_01952 | glgP | -168 | 5.1 | ATGACTACGTTTGCAA | |
| BIFGAL_01952 | glgP | -101 | 4.7 | CTGAGAACGTATGCAT | |
| BIFGAL_01825 | ppgK | -233 | 4.8 | ATGCAAACGTTTGTTA | |
| BIFGAL_00133 | malR3 | -206 | 5 | GTGAGAACGTTTGCAA | |
| BIFGAL_01513 | aapA | -228 | 5.1 | TTGACAACGTATGCAT | |
| BIFGAL_00126 | malE1 | -129 | 5.5 | TTGAATACGTTTGCAA | |
| BIFGAL_00125 | agl3 | -106 | 5.5 | TTGCAAACGTATTCAA | |
| Bifidobacterium longum NCC2705 | |||||
| BL0141 | malE | -127 | 5.1 | TTGCTATCGTTTGCAA | |
| BL0143 | malF | -180 | 5.4 | TTACAAACGTTTGCAA | |
| BL0142 | malR1 | -116 | 5.4 | TTGCAAACGTTTGTAA | |
| BL0527 | malQ | -145 | 5.2 | TTGCAATCGTTGTCAA | |
| BL0279 | pgi | -142 | 5.1 | ATGCAAACGATGGCAA | |
| BL0597 | glgP | -105 | 5 | ATGCAAACGATGGCAT | |
| BL0597 | glgP | -48 | 4.9 | ATGAGAACGTATGCAA | |
| BL0047 | ppgK | -111 | 4.9 | ATGCACACGTTTGCAC | |
| BL1631 | glcP | -283 | 4.9 | CTGCAATCGTTGTCAA | |
| BL0141 | malE | -226 | 4.6 | TTGCGAACGCTTGCAT | |
| Gardnerella vaginalis 409-05 | |||||
| HMPREF0424_1303 | malF | -219 | 4.6 | AAACAAACGTTTGCAG | |
| HMPREF0424_1305 | malE | -112 | 5 | ATGCTATCGTTTGCAA | |
| HMPREF0424_1304 | malR1 | -99 | 4.6 | CTGCAAACGTTTGTTT | |
| HMPREF0424_1299 | malQ | -152 | 4.9 | TTGCAAACGATGTCAG | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |