Regulon of ThiR in Thermococcus kodakaraensis KOD1

Properties
Regulator type:	Transcription factor
TF locus tag:	TK2197
Regulator family:	[Other]
Regulation mode:	repressor
Biological process:	Thiamine transport; Thiamine biosynthesis
Effector:	Thiamine phosphate
Regulog:	ThiR - Thermococcales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 35 sites [see more]

Member of regulog collections

By trascription factor - ThiR
By taxonomy - Thermococcales
By TF family - [Other]
By effector - Thiamine phosphate
By pathway - Thiamine transport
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -63 Score: 5.6 Sequence: AAAACTAAGTTTT Position: -42 Score: 5.2 Sequence: AAAACTTTGTTAT Locus tag: TK0433 Name: thiC Funciton: Thiamin biosynthesis protein ThiC
	TK0433	thiC	Thiamin biosynthesis protein ThiC
Position: -25 Score: 4.2 Sequence: ATAACCTGGTTGT Locus tag: TK2197 Name: thiR Funciton: Thiamin-phosphate synthase-like transcriptional regulator ThiR Locus tag: TK2198 Name: yjbQ Funciton: YjbQ (alternate ThiE)
	TK2197	thiR	Thiamin-phosphate synthase-like transcriptional regulator ThiR
	TK2198	yjbQ	YjbQ (alternate ThiE)
Position: -66 Score: 5.2 Sequence: ATAACAAAGTTTT Position: -45 Score: 5.6 Sequence: AAAACTTAGTTTT Locus tag: TK0434 Name: thi4 Funciton: Thiazole biosynthetic enzyme Thi4 Locus tag: TK0435 Name: thiDN Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3)
	TK0434	thi4	Thiazole biosynthetic enzyme Thi4
	TK0435	thiDN	Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD