Regulon of ThiR in Pyrococcus abyssi GE5

Properties
Regulator type:	Transcription factor
TF locus tag:	PAB0877
Regulator family:	[Other]
Regulation mode:	repressor
Biological process:	Thiamine transport; Thiamine biosynthesis
Effector:	Thiamine phosphate
Regulog:	ThiR - Thermococcales
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 35 sites [see more]

Member of regulog collections

By trascription factor - ThiR
By taxonomy - Thermococcales
By TF family - [Other]
By effector - Thiamine phosphate
By pathway - Thiamine transport
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -37 Score: 4.1 Sequence: AAAATCTTATTTT Locus tag: PAB1835 Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
	PAB1835	thiB	Thiamin ABC transporter, substrate-binding component
Position: -70 Score: 5.1 Sequence: ATAACCAAGTTTT Locus tag: PAB1641 Name: tenA1 Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: PAB1642 Name: tenA2 Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: PAB1643 Name: cytX Funciton: Hydroxymethylpyrimidine transporter CytX Locus tag: PAB2432 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: PAB1645 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: PAB1646 Name: thiDN Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3)
	PAB1641	tenA1	Thiaminase II (EC 3.5.99.2)
	PAB1642	tenA2	Thiaminase II (EC 3.5.99.2)
	PAB1643	cytX	Hydroxymethylpyrimidine transporter CytX
	PAB2432	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	PAB1645	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	PAB1646	thiDN	Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate synthase ThiN (EC 2.5.1.3)
Position: -38 Score: 4.4 Sequence: ATTACTTGGTTTT Locus tag: PAB1930 Name: thiC Funciton: Thiamin biosynthesis protein ThiC
	PAB1930	thiC	Thiamin biosynthesis protein ThiC
Position: -47 Score: 5.2 Sequence: ATAACAAAGTTTT Position: -26 Score: 5.6 Sequence: AAAACTAAGTTTT Locus tag: PAB0536 Name: thi4 Funciton: Thiazole biosynthetic enzyme Thi4
	PAB0536	thi4	Thiazole biosynthetic enzyme Thi4

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD