Regulon of CymR in Staphylococcus epidermidis ATCC 12228
| Regulator type: | Transcription factor |
| TF locus tag: | SE1308 |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Cysteine metabolism |
| Effector: | O-acetyl-L-serine; CysK, cysteine synthetase |
| Regulog: | CymR - Staphylococcaceae |
| Statistics of regulated genes: | |
| - Genes | 21 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - Rrf2
- By effector - O-acetyl-L-serine
- By effector - CysK, cysteine synthetase
- By pathway - Cysteine metabolism
| Locus Tag | Name | Function | |
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Position: -56
Score: 5.3 Sequence: TTATTCTTATTACATATGTCGGAATAC
Locus tag: SE2354
Name: tcyP Funciton: L-cystine uptake protein tcyP |
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tcyP
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L-cystine uptake protein tcyP
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Position: -40
Score: 6.2 Sequence: TTATTCCGATTAGAATAATAAGAATAA
Locus tag: SE1993
Name: tcyA Funciton: L-cystine uptake ABC transporter, L-cystine-binding protein TcyA
Locus tag: SE1992
Name: tcyB Funciton: L-cystine uptake ABC transporter, permease protein TcyB
Locus tag: SE1991
Name: tcyC Funciton: L-cystine uptake ABC transporter, ATP-binding protein TcyC |
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tcyA
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L-cystine uptake ABC transporter, L-cystine-binding protein TcyA
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tcyB
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L-cystine uptake ABC transporter, permease protein TcyB
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tcyC
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L-cystine uptake ABC transporter, ATP-binding protein TcyC
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Position: -65
Score: 4.4 Sequence: TAAAGTCGAGTGTTAAACTATGAATAA
Locus tag: SE1858
Name: SA2080 Funciton: putative acyl-CoA dehydrogenase |
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SA2080
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putative acyl-CoA dehydrogenase
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Position: -35
Score: 4.6 Sequence: AATACCTTAGTATTTATATCGGAAAAG
Locus tag: SE1646
Name: SA1850 Funciton: putative transporter for thiosulphate |
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SA1850
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putative transporter for thiosulphate
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Position: -42
Score: 5.3 Sequence: ATATTCAGATAATTTTAATCGGAAATT
Locus tag: SE2322
Name: metN2 Funciton: methionine ABC transporter paralog, ATP-binding protein MetN2
Locus tag: SE2321
Name: metP2 Funciton: methionine ABC transporter paralog, permease protein MetP2
Locus tag: SE2320
Name: metQ2 Funciton: methionine ABC transporter paralog, substrate-binding protein MetQ2 |
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metN2
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methionine ABC transporter paralog, ATP-binding protein MetN2
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metP2
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methionine ABC transporter paralog, permease protein MetP2
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metQ2
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methionine ABC transporter paralog, substrate-binding protein MetQ2
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Position: -182
Score: 5.6 Sequence: TAATTATTACTTATTTTATCGGATTTA
Locus tag: SE1732
Name: luxS Funciton: S-ribosylhomocysteinase |
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luxS
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S-ribosylhomocysteinase
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Position: -96
Score: 5.7 Sequence: TAATTCATATCTGATAAGTAAGAATTA
Locus tag: SE2324
Name: mccA Funciton: cystathionine beta-synthase
Locus tag: SE2323
Name: mccB Funciton: cystathionine gamma-lyase |
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mccA
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cystathionine beta-synthase
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mccB
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cystathionine gamma-lyase
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Position: -58
Score: 4.8 Sequence: TATATCCGATAGAAAAACTAAGTATTG
Locus tag: SE2270
Name: cysK Funciton: cysteine synthase |
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cysK
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cysteine synthase
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Position: -273
Score: 4.7 Sequence: CAAAACATAGTATTCCGATAAGAAATA
Locus tag: SE2180
Name: cysJ Funciton: sulfite reductase [NADPH] flavoprotein, alpha-component
Locus tag: SE2179
Name: cysI Funciton: sulfite reductase (NADPH) hemoprotein, beta-component
Locus tag: SE2178
Name: cysG Funciton: uroporphyrin-III C-methyltransferase
Locus tag: SE2177
Name: sirC Funciton: Precorrin-2 dehydrogenase
Locus tag: SE2176
Name: ytnM Funciton: conserved membrane protein YtnM
Locus tag: SE2175
Name: cysD Funciton: sulfate adenylyltransferase
Locus tag: SE2174
Name: cysC Funciton: adenylylsulfate kinase |
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cysJ
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sulfite reductase [NADPH] flavoprotein, alpha-component
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cysI
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sulfite reductase (NADPH) hemoprotein, beta-component
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cysG
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uroporphyrin-III C-methyltransferase
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sirC
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Precorrin-2 dehydrogenase
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ytnM
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conserved membrane protein YtnM
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cysD
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sulfate adenylyltransferase
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cysC
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adenylylsulfate kinase
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Position: -68
Score: 5 Sequence: TTATTCTGACAATTCTGATATGTTTTG
Locus tag: SE2181
Name: cysH Funciton: phosphoadenosine phosphosulfate reductase |
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cysH
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phosphoadenosine phosphosulfate reductase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |