Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NanR in Bifidobacterium breve DSM 20213

Properties
Regulator type: Transcription factor
TF locus tag: BIFBRE_01963
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Sialic acid utilization
Effector: Sialic acid
Regulog: NanR - Bifidobacteriaceae
Statistics of regulated genes:
- Genes 8
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 11 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -149
Score: 5.5
Sequence: ATAAGTTGTCTGATGTCTTAA
Position: -42
Score: 5.8
Sequence: ATCAGACATCAGATGTCATAT
Locus tag: BIFBRE_01954
Name: nanB
Funciton: Predicted sialic acid ABC transporter, solute binding component
Locus tag: BIFBRE_01955
Name: nanC
Funciton: Predicted sialic acid ABC transporter, permease component
Locus tag: BIFBRE_01956
Name: nanD
Funciton: Predicted sialic acid ABC transporter, permease component and ATP-binding component
Locus tag: BIFBRE_01957
Name: nanF
Funciton: Predicted sialic acid ABC transporter, ATP binding component
Locus tag: BIFBRE_01958
Name: nanA
Funciton: N-acetylneuraminate lyase (EC 2.5.1.56)
Locus tag: BIFBRE_01959
Name: nagB2
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
nanB
Predicted sialic acid ABC transporter, solute binding component
nanC
Predicted sialic acid ABC transporter, permease component
nanD
Predicted sialic acid ABC transporter, permease component and ATP-binding component
nanF
Predicted sialic acid ABC transporter, ATP binding component
nanA
N-acetylneuraminate lyase (EC 2.5.1.56)
nagB2
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)

Position: -36
Score: 6.3
Sequence: ATTGGACATCAGACGTCTGAT
Locus tag: BIFBRE_01949
Name: SSF51658
Funciton: Xylose isomerase-like, TIM barrel domain
Locus tag: BIFBRE_01950
Name: nanK
Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
SSF51658
Xylose isomerase-like, TIM barrel domain
nanK
N-acetylmannosamine kinase (EC 2.7.1.60)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD