Regulon of GarR in Bacillus clausii KSM-K16

Properties
Regulator type:	Transcription factor
TF locus tag:	ABC3016
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Galactarate utilization
Effector:	Galactarate
Regulog:	GarR - Bacillales
Statistics of regulated genes:
- Genes	7
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - GntR/Others
By effector - Galactarate
By pathway - Galactarate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -42 Score: 6.3 Sequence: TGTGATATATCAGATTTCATA Locus tag: ABC3016 Name: garR Funciton: Predicted transcriptional regulator for galactarate utilization, GntR family Locus tag: ABC3015 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: ABC3014 Name: kgsD Funciton: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # in D-glucarate/D-galactarate catabolism Locus tag: ABC3013 Name: garD2 Funciton: D-galactarate dehydratase (EC 4.2.1.42), alternative enzyme Locus tag: ABC3012 Name: tctC_Gar Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for galactarate Locus tag: ABC3011 Name: tctB_Gar Funciton: Tripartite tricarboxylate transporter family small permease component, putative transporter for galactarate Locus tag: ABC3010 Name: tctA_Gar Funciton: Tripartite tricarboxylate transporter family large permease component, putative transporter for galactarate
	ABC3016	garR	Predicted transcriptional regulator for galactarate utilization, GntR family
	ABC3015	kdgD	5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
	ABC3014	kgsD	Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # in D-glucarate/D-galactarate catabolism
	ABC3013	garD2	D-galactarate dehydratase (EC 4.2.1.42), alternative enzyme
	ABC3012	tctC_Gar	Tripartite tricarboxylate transporter family receptor, putative transporter for galactarate
	ABC3011	tctB_Gar	Tripartite tricarboxylate transporter family small permease component, putative transporter for galactarate
	ABC3010	tctA_Gar	Tripartite tricarboxylate transporter family large permease component, putative transporter for galactarate

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