Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of ScrR in Bifidobacterium dentium Bd1

Properties
Regulator type: Transcription factor
TF locus tag: BDP_0102
Regulator family: LacI
Regulation mode:
Biological process: Sucrose utilization
Effector: Sucrose
Regulog: ScrR - Bifidobacteriaceae
Statistics of regulated genes:
- Genes 7
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 23 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -147
Score: 6.3
Sequence: TTATCGAACCGGTTTGACAG
Locus tag: BDP_0112
Name: null
Funciton: sugar ABC uptake system, solute-binding protein
Locus tag: BDP_0113
Name: null
Funciton: sugar ABC transport system, permease component
Locus tag: BDP_0114
Name: null
Funciton: sugar ABC uptake system, permease component
sugar ABC uptake system, solute-binding protein
sugar ABC transport system, permease component
sugar ABC uptake system, permease component

Position: -205
Score: 6.3
Sequence: CTGTCAAACCGGTTCGATAA
Locus tag: BDP_0111
Name: null
Funciton: oligo-1,6-glucosidase
oligo-1,6-glucosidase

Position: -87
Score: 6.8
Sequence: ATATCGAACCGGTTCGATAT
Locus tag: BDP_0109
Name: scrP
Funciton: Sucrose phosphorylase (EC 2.4.1.7)
scrP
Sucrose phosphorylase (EC 2.4.1.7)

Position: -113
Score: 6.8
Sequence: ATATCGAACCGGTTCGACAC
Position: -50
Score: 7
Sequence: GTATCGAACCGGTTCGATAC
Locus tag: BDP_0115
Name: scrT2
Funciton: Sucrose permease, MFS family
Locus tag: BDP_0116
Name: scrT1
Funciton: Sucrose permease, MFS family
scrT2
Sucrose permease, MFS family
scrT1
Sucrose permease, MFS family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD