Regulon of Crp in Gardnerella vaginalis 409-05

Properties
Regulator type:	Transcription factor
TF locus tag:	HMPREF0424_0303
Regulator family:	CRP
Regulation mode:
Biological process:	Tricarboxylic acid cycle; Energy metabolism
Effector:
Regulog:	Crp - Bifidobacteriaceae
Statistics of regulated genes:
- Genes	7
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 52 sites [see more]

Member of regulog collections

By taxonomy - Bifidobacteriaceae
By TF family - CRP
By pathway - Tricarboxylic acid cycle
By pathway - Energy metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -215 Score: 4.8 Sequence: AAATGTAATTTATTTCACAAAA Locus tag: HMPREF0424_0180 Name: gnd Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
	HMPREF0424_0180	gnd	6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Position: -232 Score: 5 Sequence: TTTTGTGAAATAAATTACATTT Locus tag: HMPREF0424_0179 Name: nrdH Funciton: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib Locus tag: HMPREF0424_0178 Name: nrdI Funciton: Ribonucleotide reduction protein NrdI Locus tag: HMPREF0424_0177 Name: nrdE Funciton: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
	HMPREF0424_0179	nrdH	Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
	HMPREF0424_0178	nrdI	Ribonucleotide reduction protein NrdI
	HMPREF0424_0177	nrdE	Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Position: -119 Score: 5.3 Sequence: AAATGTGATATATTTCACTAGA Locus tag: HMPREF0424_0886 Name: pflB Funciton: Pyruvate formate-lyase (EC 2.3.1.54) Locus tag: HMPREF0424_0885 Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
	HMPREF0424_0886	pflB	Pyruvate formate-lyase (EC 2.3.1.54)
	HMPREF0424_0885	pflA	Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -96 Score: 5.8 Sequence: AATTGTGACTTGTATCACATAT Locus tag: HMPREF0424_0254 Name: adh Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
	HMPREF0424_0254	adh	Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD