Regulon of RspR in Paracoccus denitrificans PD1222
| Regulator type: | Transcription factor |
| TF locus tag: | |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | L-gulonate utilization |
| Effector: | L-gulonate; D-mannonate |
| Regulog: | RspR - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - GntR/Others
- By effector - L-gulonate
- By effector - D-mannonate
- By pathway - L-gulonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -48
Score: 5.8 Sequence: TTTACTAGTATGCAAGTATG
Locus tag: Pden_5067
Name: rspR Funciton: Transcriptional regulator for L-gulonate utilization, GntR family
Locus tag: Pden_5066
Name: rspP Funciton: L-gulonate/D-mannonate-specific TRAP-type transport system, periplasmic component
Locus tag: Pden_5065
Name: rspQ Funciton: L-gulonate/D-mannonate-specific TRAP-type transport system, small permease component
Locus tag: Pden_5064
Name: rspM Funciton: L-gulonate/D-mannonate-specific TRAP-type transport system, large permease component
Locus tag: Pden_5063
Name: rspB Funciton: L-gulonate dehydrogenase, COG1063 family
Locus tag: Pden_5062
Name: COG1304 Funciton: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
Locus tag: Pden_5061
Name: uxuA Funciton: Mannonate dehydratase (EC 4.2.1.8)
Locus tag: Pden_5060
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: Pden_5059
Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) |
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rspR
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Transcriptional regulator for L-gulonate utilization, GntR family
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rspP
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L-gulonate/D-mannonate-specific TRAP-type transport system, periplasmic component
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rspQ
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L-gulonate/D-mannonate-specific TRAP-type transport system, small permease component
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rspM
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L-gulonate/D-mannonate-specific TRAP-type transport system, large permease component
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rspB
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L-gulonate dehydrogenase, COG1063 family
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COG1304
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L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
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uxuA
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Mannonate dehydratase (EC 4.2.1.8)
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uxuB
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D-mannonate oxidoreductase (EC 1.1.1.57)
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kdgK
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2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |