Regulon of RspR in Citrobacter koseri ATCC BAA-895
| Regulator type: | Transcription factor |
| TF locus tag: | CKO_01570 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | L-gulonate utilization |
| Effector: | L-gulonate; D-mannonate |
| Regulog: | RspR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - GntR/Others
- By effector - L-gulonate
- By effector - D-mannonate
- By pathway - L-gulonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -133
Score: 5.6 Sequence: TACACTTGTATGGTAGTAGA
Locus tag: CKO_03735
Name: uxaC2 Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: CKO_03734
Name: COG2211 Funciton: Oligogalacturonide transporter
Locus tag: CKO_03733
Name: rspD Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) |
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uxaC2
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Uronate isomerase (EC 5.3.1.12)
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COG2211
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Oligogalacturonide transporter
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rspD
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D-mannonate oxidoreductase (EC 1.1.1.57)
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Position: -70
Score: 5.8 Sequence: TATACTTGTATGGTAGTAGT
Locus tag: CKO_01575
Name: rspA Funciton: D-mannonate dehydratase (EC 4.2.1.8), COG4948 family
Locus tag: CKO_01574
Name: rspB Funciton: L-gulonate dehydrogenase, COG1063 family
Locus tag: CKO_01573
Name: rspC Funciton: Putative gulonate transporter, MFS superfamily, COG2271 family
Locus tag: CKO_01572
Name: rspD Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) |
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rspA
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D-mannonate dehydratase (EC 4.2.1.8), COG4948 family
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rspB
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L-gulonate dehydrogenase, COG1063 family
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rspC
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Putative gulonate transporter, MFS superfamily, COG2271 family
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rspD
|
D-mannonate oxidoreductase (EC 1.1.1.57)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |