Regulon of XltR in Shewanella halifaxensis HAW-EB4
| Regulator type: | Transcription factor |
| TF locus tag: | Shal_2007 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Xylitol utilization |
| Effector: | Xylitol |
| Regulog: | XltR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - LacI
- By effector - Xylitol
- By pathway - Xylitol utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -206
Score: 6.3 Sequence: AAATGTTATCGATGTCATTT
Position: -42
Score: 6 Sequence: TAATGACATCGATAACATAA
Locus tag: Shal_2008
Name: xltF Funciton: Xylitol dehydrogenase (EC 1.1.1.9)
Locus tag: Shal_2009
Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: Shal_2010
Name: xltA Funciton: Xylitol ABC transporter, ATP-binding component
Locus tag: Shal_2011
Name: xltB Funciton: Xylitol ABC transporter, permease component
Locus tag: Shal_2012
Name: xltC Funciton: Xylitol ABC transporter, periplasmic substrate-binding protein |
|||
|
xltF
|
Xylitol dehydrogenase (EC 1.1.1.9)
|
||
|
xylB
|
Xylulose kinase (EC 2.7.1.17)
|
||
|
xltA
|
Xylitol ABC transporter, ATP-binding component
|
||
|
xltB
|
Xylitol ABC transporter, permease component
|
||
|
xltC
|
Xylitol ABC transporter, periplasmic substrate-binding protein
|
||
|
Position: -312
Score: 6 Sequence: TTATGTTATCGATGTCATTA
Position: -148
Score: 6.3 Sequence: AAATGACATCGATAACATTT
Locus tag: Shal_2007
Name: xltR Funciton: Transcriptional regulator of xylitol utilization, LacI family |
|||
|
xltR
|
Transcriptional regulator of xylitol utilization, LacI family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |