Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of YrdX in Rhizobium leguminosarum bv. viciae 3841

Properties
Regulator type: Transcription factor
TF locus tag: RL1422
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Regulog: YrdX - Rhizobiales
Statistics of regulated genes:
- Genes 8
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -65
Score: 7.3
Sequence: ATTGAATG-(14)-ATTGATTG
Locus tag: RL1423
Name: COG5349
Funciton: conserved hypothetical protein in cyt c oxidase gene clusters
COG5349
conserved hypothetical protein in cyt c oxidase gene clusters

Position: -227
Score: 6.3
Sequence: ATTGACGA-(3)-ATTGAATG
Position: -129
Score: 7.1
Sequence: TTTGATTG-(4)-ATTGAATG
Position: -117
Score: 7.1
Sequence: ATTGAATG-(13)-TTTGACTG
Position: -69
Score: 6.2
Sequence: CTGGCATG-(9)-ATTGGATG
Locus tag: RL0661
Name: PF02635
Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
Locus tag: RL0660
Name: COG388
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
Locus tag: RL0659
Name: COG2516
Funciton: Biotin synthase-related radical SAM domain protein
Locus tag: RL0658
Name: COG3153
Funciton: GCN5-related N-acetyltransferase
Locus tag: RL0657
Name: COG2144
Funciton: AIR synthase related protein/Selenophosphate synthetase-related
Locus tag: RL0656
Name: COG438 (RfaG)
Funciton: Glycosyltransferase
Locus tag: RL0655
Name: AZC_0067
Funciton: NAD/NADP transhydrogenase alpha subunit
PF02635
probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
COG388
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
COG2516
Biotin synthase-related radical SAM domain protein
COG3153
GCN5-related N-acetyltransferase
COG2144
AIR synthase related protein/Selenophosphate synthetase-related
COG438 (RfaG)
Glycosyltransferase
AZC_0067
NAD/NADP transhydrogenase alpha subunit
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD