Regulon of YrdX in Burkholderia phymatum STM815
| Regulator type: | Transcription factor |
| TF locus tag: | Bphy_4559 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Regulog: | YrdX - Burkholderia |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 1 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - GntR/MocR
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -127
Score: 7 Sequence: ATTGATCG-(3)-GTTGATTG
Position: -90
Score: 5.4 Sequence: TTGGCATA-(3)-GTTGCGTT
Locus tag: Bphy_4560
Name: PF02635 Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
Locus tag: Bphy_4561
Name: COG388 Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
Locus tag: Bphy_4562
Name: COG2516 Funciton: Biotin synthase-related radical SAM domain protein
Locus tag: Bphy_4563
Name: COG3153 Funciton: GCN5-related N-acetyltransferase
Locus tag: Bphy_4564
Name: COG2144 Funciton: AIR synthase related protein/Selenophosphate synthetase-related
Locus tag: Bphy_4565
Name: COG438 (RfaG) Funciton: Glycosyltransferase
Locus tag: Bphy_4566
Name: Bphy_4566 Funciton: NAD/NADP transhydrogenase alpha subunit
Locus tag: Bphy_4567
Name: COG2072 (TrkA) Funciton: FAD dependent oxidoreductase |
|||
|
PF02635
|
probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
|
||
|
COG388
|
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
|
||
|
COG2516
|
Biotin synthase-related radical SAM domain protein
|
||
|
COG3153
|
GCN5-related N-acetyltransferase
|
||
|
COG2144
|
AIR synthase related protein/Selenophosphate synthetase-related
|
||
|
COG438 (RfaG)
|
Glycosyltransferase
|
||
|
Bphy_4566
|
NAD/NADP transhydrogenase alpha subunit
|
||
|
COG2072 (TrkA)
|
FAD dependent oxidoreductase
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |