Regulon of TrpR in Shewanella sediminis HAW-EB3

Properties
Regulator type:	Transcription factor
TF locus tag:	Ssed_1172
Regulator family:	TrpR
Regulation mode:	repressor
Biological process:	Aromatic amino acid metabolism
Effector:	Tryptophan
Regulog:	TrpR - Shewanellaceae
Statistics of regulated genes:
- Genes	3
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 32 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - TrpR
By TF family - TrpR
By effector - Tryptophan
By pathway - Aromatic amino acid metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -31 Score: 6.1 Sequence: TGTAATGCTATACCAGTACG Locus tag: Ssed_1172 Name: trpR Funciton: Trp operon repressor
	Ssed_1172	trpR	Trp operon repressor
Position: -96 Score: 6.6 Sequence: TGTAATGGTGTAGCAGTACG Locus tag: Ssed_1163 Name: aroF Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54) Locus tag: Ssed_1164 Name: tyrA Funciton: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)
	Ssed_1163	aroF	2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
	Ssed_1164	tyrA	Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD