Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator TrpR in Shewanellaceae

Properties
Regulator family: TrpR
Regulation mode: repressor
Biological process: Aromatic amino acid metabolism
Effector: Tryptophan
Regulog: TrpR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO1361 aroF -119 6.4 TGTAATGGTGTATCATTACG
SO3419 trpR -32 5.9 TGTAATGCTTAAACAATACT
Shewanella putrefaciens CN-32
Sputcn32_2737 trpR -89 5 TGTAATGAAGAAGCGTAACA
Sputcn32_2737 trpR -32 5.9 TGTAATGCTTTAACAGTAGT
Sputcn32_1172 aroF -125 6.5 TGTAATGGTGTAGCGTTACA
Shewanella sp W3-18-1
Sputw3181_1275 trpR -32 5.9 TGTAATGCTTTAACAGTAGT
Sputw3181_1275 trpR -89 5 TGTAATGAAGAAGCGTAACA
Sputw3181_2992 aroF -125 6.5 TGTAATGGTGTAGCGTTACA
Shewanella sp ANA-3
Shewana3_1136 trpR -32 5.9 TGTAATGCTTAAACAATACT
Shewana3_3013 aroF -120 6.5 TGTAATGGTGTATCATTACA
Shewanella sp MR-4
Shewmr4_1135 trpR -32 5.9 TGTAATGCTTAAACAATACT
Shewmr4_2834 aroF -120 6.7 TGTAATGGTGTAGCATTACA
Shewanella sp MR-7
Shewmr7_2916 aroF -120 6.6 TGTAATGGTGTAGCATTACG
Shewmr7_1206 trpR -32 5.9 TGTAATGCTTAAACAATACT
Shewanella baltica OS155
Sbal_1224 trpR -33 5.9 TGTAATGCTTGAACAGTACT
Sbal_1214 aroF -130 6.7 TGTAATGGTGTAGCATTACA
Shewanella denitrificans OS217
Sden_2743 trpR -33 4.8 TGTACTGCCATGGCATGACA
Sden_2750 aroF -60 6.5 TGTAATGGTGTATCATTACA
Shewanella frigidimarina NCIMB 400
Sfri_2909 trpR -35 5.2 TGTAATGTCTGGGCATTACT
Sfri_2916 aroF -102 6.5 TGTAATGGTGTAGCGTTACA
Shewanella amazonensis SB2B
Sama_0893 aroF -104 6.6 TGTAATGGTGTAACATTACA
Shewanella loihica PV-4
Shew_1067 aroF -65 6.6 TGTAATGGTGTACCATTACG
Shewanella pealeana ATCC 700345
Spea_1063 trpR -45 5.4 TGTAATGACGCACTAGTACG
Spea_1053 aroF -122 6.4 TGTAATGGTGTACCGTTACA
Shewanella halifaxensis HAW-EB4
Shal_1111 trpR -47 5.1 CGTAATGACGCACTAGTACG
Shal_1101 aroF -134 6.3 TGTAATGGTGTACCGTTACG
Shewanella piezotolerans WP3
swp_3754 trpR -34 5.5 CGTAATGATGCACTAGTACA
swp_3764 aroF -104 6.6 TGTAATGGTGTAGCAGTACG
Shewanella sediminis HAW-EB3
Ssed_1172 trpR -31 6.1 TGTAATGCTATACCAGTACG
Ssed_1163 aroF -96 6.6 TGTAATGGTGTAGCAGTACG
Shewanella woodyi ATCC 51908
Swoo_1267 trpR -81 5.6 TGTAATGGAGAGGCAGTACA
Swoo_1258 aroF -106 6.7 TGTAATGGTGTAGCATTACA
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