Profile of regulator TrpR in Shewanellaceae
Properties
| Regulator family: |
TrpR |
| Regulation mode: |
repressor |
| Biological process: |
Aromatic amino acid metabolism |
| Effector: |
Tryptophan |
| Regulog: |
TrpR - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella oneidensis MR-1
|
|
SO1361 |
aroF |
-119 |
6.4 |
TGTAATGGTGTATCATTACG |
|
SO3419 |
trpR |
-32 |
5.9 |
TGTAATGCTTAAACAATACT |
|
Shewanella putrefaciens CN-32
|
|
Sputcn32_2737 |
trpR |
-89 |
5 |
TGTAATGAAGAAGCGTAACA |
|
Sputcn32_2737 |
trpR |
-32 |
5.9 |
TGTAATGCTTTAACAGTAGT |
|
Sputcn32_1172 |
aroF |
-125 |
6.5 |
TGTAATGGTGTAGCGTTACA |
|
Shewanella sp W3-18-1
|
|
Sputw3181_1275 |
trpR |
-32 |
5.9 |
TGTAATGCTTTAACAGTAGT |
|
Sputw3181_1275 |
trpR |
-89 |
5 |
TGTAATGAAGAAGCGTAACA |
|
Sputw3181_2992 |
aroF |
-125 |
6.5 |
TGTAATGGTGTAGCGTTACA |
|
Shewanella sp ANA-3
|
|
Shewana3_1136 |
trpR |
-32 |
5.9 |
TGTAATGCTTAAACAATACT |
|
Shewana3_3013 |
aroF |
-120 |
6.5 |
TGTAATGGTGTATCATTACA |
|
Shewanella sp MR-4
|
|
Shewmr4_1135 |
trpR |
-32 |
5.9 |
TGTAATGCTTAAACAATACT |
|
Shewmr4_2834 |
aroF |
-120 |
6.7 |
TGTAATGGTGTAGCATTACA |
|
Shewanella sp MR-7
|
|
Shewmr7_2916 |
aroF |
-120 |
6.6 |
TGTAATGGTGTAGCATTACG |
|
Shewmr7_1206 |
trpR |
-32 |
5.9 |
TGTAATGCTTAAACAATACT |
|
Shewanella baltica OS155
|
|
Sbal_1224 |
trpR |
-33 |
5.9 |
TGTAATGCTTGAACAGTACT |
|
Sbal_1214 |
aroF |
-130 |
6.7 |
TGTAATGGTGTAGCATTACA |
|
Shewanella denitrificans OS217
|
|
Sden_2743 |
trpR |
-33 |
4.8 |
TGTACTGCCATGGCATGACA |
|
Sden_2750 |
aroF |
-60 |
6.5 |
TGTAATGGTGTATCATTACA |
|
Shewanella frigidimarina NCIMB 400
|
|
Sfri_2909 |
trpR |
-35 |
5.2 |
TGTAATGTCTGGGCATTACT |
|
Sfri_2916 |
aroF |
-102 |
6.5 |
TGTAATGGTGTAGCGTTACA |
|
Shewanella amazonensis SB2B
|
|
Sama_0893 |
aroF |
-104 |
6.6 |
TGTAATGGTGTAACATTACA |
|
Shewanella loihica PV-4
|
|
Shew_1067 |
aroF |
-65 |
6.6 |
TGTAATGGTGTACCATTACG |
|
Shewanella pealeana ATCC 700345
|
|
Spea_1063 |
trpR |
-45 |
5.4 |
TGTAATGACGCACTAGTACG |
|
Spea_1053 |
aroF |
-122 |
6.4 |
TGTAATGGTGTACCGTTACA |
|
Shewanella halifaxensis HAW-EB4
|
|
Shal_1111 |
trpR |
-47 |
5.1 |
CGTAATGACGCACTAGTACG |
|
Shal_1101 |
aroF |
-134 |
6.3 |
TGTAATGGTGTACCGTTACG |
|
Shewanella piezotolerans WP3
|
|
swp_3754 |
trpR |
-34 |
5.5 |
CGTAATGATGCACTAGTACA |
|
swp_3764 |
aroF |
-104 |
6.6 |
TGTAATGGTGTAGCAGTACG |
|
Shewanella sediminis HAW-EB3
|
|
Ssed_1172 |
trpR |
-31 |
6.1 |
TGTAATGCTATACCAGTACG |
|
Ssed_1163 |
aroF |
-96 |
6.6 |
TGTAATGGTGTAGCAGTACG |
|
Shewanella woodyi ATCC 51908
|
|
Swoo_1267 |
trpR |
-81 |
5.6 |
TGTAATGGAGAGGCAGTACA |
|
Swoo_1258 |
aroF |
-106 |
6.7 |
TGTAATGGTGTAGCATTACA |
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Regulatory Sites
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