Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NifA in Zymomonas mobilis subsp. mobilis ZM4

Properties
Regulator type: Transcription factor
TF locus tag: ZMO1816
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Regulog: NifA - Sphingomonadales
Statistics of regulated genes:
- Genes 24
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 6 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -427
Score: 4
Sequence: TGTCAGGCTGCATCCA
Position: -145
Score: 3.8
Sequence: TTTACCGATACCGACA
Position: -125
Score: 3.5
Sequence: TGTAAGAGTTAAGACA
Locus tag: ZMO1817
Name: nifB
Funciton: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
Locus tag: ZMO1818
Name: fdxN
Funciton: 4Fe-4S ferredoxin, nitrogenase-associated
ZMO1817
nifB
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
ZMO1818
fdxN
4Fe-4S ferredoxin, nitrogenase-associated
Position: -179
Score: 4.6
Sequence: TGTCGCGCTTCGAACA
Locus tag: ZMO1823
Name: nifH
Funciton: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Locus tag: ZMO1824
Name: nifD
Funciton: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
Locus tag: ZMO1825
Name: nifK
Funciton: Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
Locus tag: ZMO1826
Name: nifE
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Locus tag: ZMO1827
Name: nifN
Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
Locus tag: ZMO1828
Name: nifX
Funciton: Nitrogenase FeMo-cofactor carrier protein NifX
Locus tag: ZMO1829
Name: PF03270
Funciton: Conserved hypothetical protein, probably related to nitrogen fixation protein
Locus tag: ZMO2028
Name: fdxB
Funciton: Nitrogenase specific ferredoxin III protein FdxB
Locus tag: ZMO1831
Name: nifQ
Funciton: Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
ZMO1823
nifH
Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
ZMO1824
nifD
Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1)
ZMO1825
nifK
Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1)
ZMO1826
nifE
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
ZMO1827
nifN
Nitrogenase FeMo-cofactor scaffold and assembly protein NifN
ZMO1828
nifX
Nitrogenase FeMo-cofactor carrier protein NifX
ZMO1829
PF03270
Conserved hypothetical protein, probably related to nitrogen fixation protein
ZMO2028
fdxB
Nitrogenase specific ferredoxin III protein FdxB
ZMO1831
nifQ
Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ
Position: -143
Score: 4.2
Sequence: TGTTCAAAAGCCTACA
Locus tag: ZMO1832
Name: iscN
Funciton: Fe-S cofactor nitrogenase synthesis protein IscN
Locus tag: ZMO1833
Name: nifU
Funciton: Iron-sulfur cluster assembly scaffold protein NifU
Locus tag: ZMO1834
Name: nifS
Funciton: Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
Locus tag: ZMO1835
Name: nifV
Funciton: Homocitrate synthase (EC 2.3.3.14)
Locus tag: ZMO1836
Name: nifW
Funciton: nitrogen fixation protein NifW
Locus tag: ZMO1837
Name: modD
Funciton: Molybdenum transport system protein ModD
ZMO1832
iscN
Fe-S cofactor nitrogenase synthesis protein IscN
ZMO1833
nifU
Iron-sulfur cluster assembly scaffold protein NifU
ZMO1834
nifS
Cysteine desulfurase (EC 2.8.1.7), NifS subfamily
ZMO1835
nifV
Homocitrate synthase (EC 2.3.3.14)
ZMO1836
nifW
nitrogen fixation protein NifW
ZMO1837
modD
Molybdenum transport system protein ModD
Position: -213
Score: 4.4
Sequence: TGTCACTTTTGCGACA
Locus tag: ZMO1814
Name: rnfA
Funciton: Electron transport complex protein RnfA
Locus tag: ZMO1813
Name: rnfB
Funciton: Electron transport complex protein RnfB
Locus tag: ZMO1812
Name: rnfC
Funciton: Electron transport complex protein RnfC
Locus tag: ZMO1811
Name: rnfD
Funciton: Electron transport complex protein RnfD
Locus tag: ZMO1810
Name: rnfG
Funciton: Electron transport complex protein RnfG
Locus tag: ZMO1809
Name: rnfE
Funciton: Electron transport complex protein RnfE
Locus tag: ZMO1808
Name: rnfH
Funciton: Electron transport complex protein RnfH
ZMO1814
rnfA
Electron transport complex protein RnfA
ZMO1813
rnfB
Electron transport complex protein RnfB
ZMO1812
rnfC
Electron transport complex protein RnfC
ZMO1811
rnfD
Electron transport complex protein RnfD
ZMO1810
rnfG
Electron transport complex protein RnfG
ZMO1809
rnfE
Electron transport complex protein RnfE
ZMO1808
rnfH
Electron transport complex protein RnfH
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise