Regulon of TrpR in Shewanella oneidensis MR-1
| Regulator type: | Transcription factor |
| TF locus tag: | SO3419 |
| Regulator family: | TrpR |
| Regulation mode: | repressor |
| Biological process: | Aromatic amino acid metabolism |
| Effector: | Tryptophan |
| Regulog: | TrpR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - TrpR
- By TF family - TrpR
- By effector - Tryptophan
- By pathway - Aromatic amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -119
Score: 6.4 Sequence: TGTAATGGTGTATCATTACG
Locus tag: SO1361
Name: aroF Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
Locus tag: SO1362
Name: tyrA Funciton: Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) |
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aroF
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2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (EC 2.5.1.54)
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tyrA
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Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43)
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Position: -32
Score: 5.9 Sequence: TGTAATGCTTAAACAATACT
Locus tag: SO3419
Name: trpR Funciton: Trp operon repressor |
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trpR
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Trp operon repressor
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |