Regulon of AgaR in Clostridium difficile 630

Properties
Regulator type:	Transcription factor
TF locus tag:	CD3452
Regulator family:	GntR/Others
Regulation mode:
Biological process:	N-acetylgalactosamine utilization
Effector:
Regulog:	AgaR - Clostridia-2
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-2
By TF family - GntR/Others
By pathway - N-acetylgalactosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -251 Score: 5.9 Sequence: TAAGTGGTTATTACCACAAT Position: -106 Score: 5.9 Sequence: AAATTGGTAATAACCACTTT Locus tag: CD3451 Name: agaZ Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144)
	CD3451	agaZ	Tagatose-6-phosphate kinase (EC 2.7.1.144)
Position: -182 Score: 5.9 Sequence: AAAGTGGTTATTACCAATTT Position: -37 Score: 5.9 Sequence: ATTGTGGTAATAACCACTTA Locus tag: CD3452 Name: agaR Funciton: Transcriptional regulator of N-Acetylgalactosamine utilization, GntR family Locus tag: CD3453 Name: agaA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	CD3452	agaR	Transcriptional regulator of N-Acetylgalactosamine utilization, GntR family
	CD3453	agaA	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Position: -246 Score: 6.1 Sequence: TTAGTGGTAATTACCACTTT Position: -53 Score: 5.1 Sequence: AAAGTGGGTATAACCTCATT Locus tag: CD3449 Name: agaS Funciton: Galactosamine-6-phosphate isomerase (EC 5.3.1.-) Locus tag: CD3448 Name: agaY Funciton: Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)
	CD3449	agaS	Galactosamine-6-phosphate isomerase (EC 5.3.1.-)
	CD3448	agaY	Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD