Regulon of UxuR in Ruminococcus gnavus ATCC 29149

Properties
Regulator type:	Transcription factor
TF locus tag:	RUMGNA_00428
Regulator family:	LacI
Regulation mode:
Biological process:	Glucuronate utilization
Effector:
Regulog:	UxuR - Clostridia-3
Statistics of regulated genes:
- Genes	5
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 40 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By TF family - LacI
By pathway - Glucuronate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -215 Score: 5.6 Sequence: AAATGTAAGTACTAACACTA Position: -17 Score: 5.5 Sequence: TAATGTAAGCTGTTACAATG Locus tag: RUMGNA_00427 Name: pgl Funciton: Polygalacturonase (EC 3.2.1.15)
	RUMGNA_00427	pgl	Polygalacturonase (EC 3.2.1.15)
Position: -183 Score: 6.1 Sequence: TTTTGTAAGCCCTTACATTT Position: -43 Score: 5.9 Sequence: AATTGTAAATACTTACATTT Locus tag: RUMGNA_00433 Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7) Locus tag: RUMGNA_00434 Name: uxaB Funciton: Altronate oxidoreductase (EC 1.1.1.58)
	RUMGNA_00433	uxaA	Altronate hydrolase (EC 4.2.1.7)
	RUMGNA_00434	uxaB	Altronate oxidoreductase (EC 1.1.1.58)
Position: -255 Score: 5.5 Sequence: CATTGTAACAGCTTACATTA Position: -57 Score: 5.6 Sequence: TAGTGTTAGTACTTACATTT Locus tag: RUMGNA_00428 Name: uxuR Funciton: Predicted transcription regulator for glucuronate utilization, LacI family
	RUMGNA_00428	uxuR	Predicted transcription regulator for glucuronate utilization, LacI family
Position: -197 Score: 5.9 Sequence: AAATGTAAGTATTTACAATT Position: -57 Score: 6.1 Sequence: AAATGTAAGGGCTTACAAAA Locus tag: RUMGNA_00432 Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12)
	RUMGNA_00432	uxaC	Uronate isomerase (EC 5.3.1.12)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD