Regulon of AcnR in Actinosynnema mirum DSM 43827
| Regulator type: | Transcription factor |
| TF locus tag: | Amir_2120 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Tricarboxylic acid cycle |
| Effector: | Citrate |
| Regulog: | AcnR - Frankineae/Propionibacterineae/Pseudonocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By trascription factor - AcnR
- By TF family - TetR
- By effector - Citrate
- By pathway - Tricarboxylic acid cycle
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -48
Score: 5.8 Sequence: CAGTACGCTTGTCCTG
Locus tag: Amir_6478
Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) |
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icd
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Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
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Position: -53
Score: 4.1 Sequence: CAATCCGTACGTACTG
Locus tag: Amir_2120
Name: acnR Funciton: Aconitase gene transcriptional regulator AcnR, TetR family |
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acnR
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Aconitase gene transcriptional regulator AcnR, TetR family
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Position: -103
Score: 5.8 Sequence: CAGGACACGCGTACTG
Locus tag: Amir_2132
Name: acnA Funciton: Aconitate hydratase (EC 4.2.1.3) |
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acnA
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Aconitate hydratase (EC 4.2.1.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |